CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MLOC_80500
(
Hordeum vulgare
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
MLOC_80500
T026997_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_80500.3
BED ZF
26
68
SKVWDDFTPIYIDGKLARAECMHCHQVLSSGTGNLQKHQAKCT
MLOC_80500.4
BED ZF
59
101
SKVWDDFTPIYIDGKLARAECMHCHQVLSSGTGNLQKHQAKCT
Links
Other
BED ZF
family TFs
Other
Hordeum vulgare
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA09G0063700
Oryza glaberrima
ORGLA09G0063700
N
0.814
OS09G0381800
Oryza sativa
OS09G0381800
N
0.814
ONIVA09G07590
Oryza nivara
ONIVA09G07590
N
0.814
OPUNC09G07350
Oryza punctata
OPUNC09G07350
N
0.814
OS09G0382120
Oryza sativa
OS09G0382120
N
0.805
ORUFI09G09250
Oryza rufipogon
ORUFI09G09250
N
0.805
OMERI03G02680
Oryza meridionalis
OMERI03G02680
N
0.791
BGIOSGA029844
Oryza indica
BGIOSGA029844
N
0.756
MLOC_81246
Hordeum vulgare
MLOC_81246
N
0.732
TRIUR3_10469
Triticum urartu
TRIUR3_10469
N
0.714