OGLUM01G22570 (Oryza glumaepatula)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 OGLUM01G22570 T027077_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM01G22570.1 BED ZF 229 274
OGLUM01G22570.1 BED ZF 367 407
OGLUM01G22570.1 BED ZF 559 605
OGLUM01G22570.1 BED ZF 664 709
OGLUM01G22570.2 BED ZF 229 274
OGLUM01G22570.2 BED ZF 367 407
OGLUM01G22570.2 BED ZF 559 605
OGLUM01G22570.2 BED ZF 664 709

Links

Other BED ZF family TFs
Other Oryza glumaepatula TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA001450 Oryza indica BGIOSGA001450 N 0.988
OS01G0547200 Oryza sativa OS01G0547200 N 0.988
ORUFI01G21360 Oryza rufipogon ORUFI01G21360 N 0.988
ONIVA01G21500 Oryza nivara ONIVA01G21500 N 0.988
OLONG_002006 Oryza longistaminata OLONG_002006 N 0.982
OBART01G18970 Oryza barthii OBART01G18970 N 0.982
OPUNC01G19360 Oryza punctata OPUNC01G19360 N 0.952
LPERR01G16460 Leersia perrieri LPERR01G16460 N 0.909
OB01G28790 Oryza brachyantha OB01G28790 N 0.879
Si000106m.g Setaria italica Si000106m.g N 0.829
Pavir.Eb01543 Panicum virgatum Pavir.Eb01543 N 0.815
Sb03g025310 Sorghum bicolor Sb03g025310 N 0.793