CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM12G06640
(
Oryza glumaepatula
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
OGLUM12G06640
T027083_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM12G06640.1
BED ZF
147
187
SDVWNHFTRFTDGDGRAKARCKHCPLVLGAETKSGTSTLRA
OGLUM12G06640.2
BED ZF
24
64
SDVWNHFTRFTDGDGRAKARCKHCPLVLGAETKSGTSTLRA
Links
Other
BED ZF
family TFs
Other
Oryza glumaepatula
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORUFI12G06630
Oryza rufipogon
ORUFI12G06630
N
0.946
Pavir.Fb00177
Panicum virgatum
Pavir.Fb00177
N
0.703