PGSC0003DMG401012482 (Solanum tuberosum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 PGSC0003DMG401012482 T027250_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400032498 BED ZF 6 49
PGSC0003DMT400032499 BED ZF 6 49
PGSC0003DMT400032500 BED ZF 6 49
PGSC0003DMT400032501 BED ZF 6 49

Links

Other BED ZF family TFs
Other Solanum tuberosum TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_016057 Theobroma cacao TCM_016057 N 0.975
Solyc08g007470.1 Solanum lycopersicum Solyc08g007470.1 N 0.975
evm.TU.supercontig_29.102 Carica papaya evm.TU.supercontig_29.102 N 0.950
AMTR_s00061p00028660 Amborella trichopoda AMTR_s00061p00028660 N 0.950
PDK_20s1631911g001 Phoenix dactylifera PDK_20s1631911g001 N 0.950
GSMUA_Achr8G28860_001 Musa acuminata GSMUA_Achr8G28860_001 N 0.950
gene32271-v1.0-hybrid Fragaria vesca gene32271-v1.0-hybrid N 0.950
MDP0000230416 Malus domestica MDP0000230416 N 0.925
Pm023575 Prunus mume Pm023575 N 0.925
30190.m011006 Ricinus communis 30190.m011006 N 0.900
GLYMA01G42065 Glycine max GLYMA01G42065 N 0.875
PK14046.1 Cannabis sativa PK14046.1 N 0.850