CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0002s18950
(
Populus trichocarpa
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
POPTR_0002s18950
T027354_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0002s18950.1
BED ZF
15
63
DPGWEHGIAQDERKKKVKCNYCGKIVSGGIFRLKQHLARMSGEVTHCGK
POPTR_0002s18950.1
BED ZF
139
186
DPGWEHCIAQDEKKKRVKCNYCERIISGGINRFKQHLARIPGEVAYCD
POPTR_0002s18950.2
BED ZF
11
60
DPGWEHGIAQDERKKKVKCNYCGKIVSGGIFRLKQHLARMSGEVTHCGKV
POPTR_0002s18950.2
BED ZF
135
182
DPGWEHCIAQDEKKKRVKCNYCERIISGGINRFKQHLARIPGEVAYCD
Links
Other
BED ZF
family TFs
Other
Populus trichocarpa
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy