POPTR_0012s05580 (Populus trichocarpa)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 POPTR_0012s05580 T027370_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0012s05580.1 BED ZF 57 99

Links

Other BED ZF family TFs
Other Populus trichocarpa TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_005140 Acremonium chrysogenum ACRE_005140 N 0.000
CFIO01_07240 Colletotrichum fioriniae CFIO01_07240 N 0.000
Cob_04134 Colletotrichum orbiculare Cob_04134 N 0.000
CSUB01_01838 Colletotrichum sublineola CSUB01_01838 N 0.000
estExt_fgenesh1_pg.C_sca_1_chr1_3_00671 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_00671 N 0.000
F503_00387 Ophiostoma piceae uamh F503_00387 N 0.000
FFUJ_00827 Fusarium fujikuroi FFUJ_00827 N 0.000
FGRRES_00324 Fusarium graminearum FGRRES_00324 N 0.000
FOXG_00743 Fusarium oxysporum FOXG_00743 N 0.000
FPSE_07686 Fusarium pseudograminearum FPSE_07686 N 0.000
GGTG_10922 Gaeumannomyces graminis GGTG_10922 N 0.000
GLRG_05068 Colletotrichum graminicola GLRG_05068 N 0.000
MAJ_07304 Metarhizium majus MAJ_07304 N 0.000
MAM_00993 Metarhizium album MAM_00993 N 0.000
MBR_05147 Metarhizium brunneum MBR_05147 N 0.000
MGU_01525 Metarhizium guizhouense MGU_01525 N 0.000
NCU10346 Neurospora crassa NCU10346 N 0.000
NechaG98872 Fusarium solani NechaG98872 N 0.000
NEUTE1DRAFT_84339 Neurospora tetrasperma NEUTE1DRAFT_84339 N 0.000
PODANS_3_9540 Podospora anserina PODANS_3_9540 N 0.000
SAPIO_CDS6673 Scedosporium apiospermum SAPIO_CDS6673 N 0.000
scaffold_11-snap.272.1 Neurospora discreta scaffold_11-snap.272.1 N 0.000
SMAC_04153 Sordaria macrospora SMAC_04153 N 0.000
TRIATDRAFT_281078 Trichoderma atroviride TRIATDRAFT_281078 N 0.000
UV8b_750 Ustilaginoidea virens UV8b_750 N 0.000