CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa001126mg
(
Prunus persica
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
PRUPE_ppa001126mg
T027438_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ26688
BED ZF
8
55
DPGWEHGMAQDERKKKVKCNYCGKIVSGGIYRLKQHLARVSGEVTYCD
EMJ26688
BED ZF
131
180
DPGWEHGVAQDEKKKKVKCIYCEKIVSGGINRFKQHLARIPGEVAPCKHA
Links
Other
BED ZF
family TFs
Other
Prunus persica
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm008491
Prunus mume
Pm008491
N
1.000
MDP0000314867
Malus domestica
MDP0000314867
N
0.964
MDP0000133479
Malus domestica
MDP0000133479
N
0.964
Cucsa.252180
Cucumis sativus
Cucsa.252180
N
0.952
gene22812-v1.0-hybrid
Fragaria vesca
gene22812-v1.0-hybrid
N
0.952
PK21594.1
Cannabis sativa
PK21594.1
N
0.917
VIT_05s0020g00790
Vitis vinifera
VIT_05s0020g00790
N
0.916
Carubv10013083m.g
Capsella rubella
Carubv10013083m.g
N
0.893
Thhalv10020031m.g
Eutrema salsugineum
Thhalv10020031m.g
N
0.893
Cagra.4396s0051
Capsella grandiflora
Cagra.4396s0051
N
0.893
Bostr.19424s0919
Boechera stricta
Bostr.19424s0919
N
0.893
GSMUA_Achr3G12820_001
Musa acuminata
GSMUA_Achr3G12820_001
N
0.881
GLYMA09G09291
Glycine max
GLYMA09G09291
N
0.880
29889.m003394
Ricinus communis
29889.m003394
N
0.880
Bo00763s120
Brassica oleracea
Bo00763s120
N
0.877
AT3G17450
Arabidopsis thaliana
AT3G17450
N
0.869
GLYMA15G21351
Glycine max
GLYMA15G21351
N
0.869
TCM_021492
Theobroma cacao
TCM_021492
N
0.857
LjT35D18.120.nc
Lotus japonicus
LjT35D18.120.nc
N
0.857
SapurV1A.0294s0300
Salix purpurea
SapurV1A.0294s0300
N
0.845
POPTR_0014s10940
Populus trichocarpa
POPTR_0014s10940
N
0.845
cassava36089.valid.m1
Manihot esculenta
cassava36089.valid.m1
N
0.845
TCM_004927
Theobroma cacao
TCM_004927
N
0.845
orange1.1g044693m.g
Citrus sinensis
orange1.1g044693m.g
N
0.845
Ciclev10024195m.g
Citrus clementina
Ciclev10024195m.g
N
0.845
evm.TU.supercontig_519.2
Carica papaya
evm.TU.supercontig_519.2
N
0.833
Eucgr.B02527
Eucalyptus grandis
Eucgr.B02527
N
0.833
Aquca_029_00055
Aquilegia coerulea
Aquca_029_00055
N
0.833
SapurV1A.0014s0420
Salix purpurea
SapurV1A.0014s0420
N
0.831
POPTR_0002s18950
Populus trichocarpa
POPTR_0002s18950
N
0.821
Gorai.008G135400
Gossypium raimondii
Gorai.008G135400
N
0.821