CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb01g003040
(
Sorghum bicolor
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Sb01g003040
T027568_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb01g003040.1
BED ZF
40
89
DPAWKHCVMVRSDGRLRLKCAYCGKHFLGGGIHRFKEHLARRPGNACCCP
Links
Other
BED ZF
family TFs
Other
Sorghum bicolor
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ia00276
Panicum virgatum
Pavir.Ia00276
N
0.953
Pavir.J07775
Panicum virgatum
Pavir.J07775
N
0.953
Si038722m.g
Setaria italica
Si038722m.g
N
0.930
Traes_5BL_1FA8B5075
Triticum aestivum
Traes_5BL_1FA8B5075
N
0.907
MLOC_64929
Hordeum vulgare
MLOC_64929
N
0.907
BRADI1G03570
Brachypodium distachyon
BRADI1G03570
N
0.907
ORGLA03G0360400
Oryza glaberrima
ORGLA03G0360400
N
0.884
OS03G0822900
Oryza sativa
OS03G0822900
N
0.884
BGIOSGA013845
Oryza indica
BGIOSGA013845
N
0.884
OB03G46220
Oryza brachyantha
OB03G46220
N
0.837
GSMUA_Achr9G03400_001
Musa acuminata
GSMUA_Achr9G03400_001
N
0.767