CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb08g005330
(
Sorghum bicolor
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Sb08g005330
T027616_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb08g005330.1
BED ZF
124
173
SMVWEHFTTEDSEGCTRACCKHCNGIFAYSSGSKMSGTSHLKRHITQGHC
Links
Other
BED ZF
family TFs
Other
Sorghum bicolor
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si000401m.g
Setaria italica
Si000401m.g
N
0.841
Pavir.J28126
Panicum virgatum
Pavir.J28126
N
0.765
GSMUA_Achr10G16260_001
Musa acuminata
GSMUA_Achr10G16260_001
N
0.750
OB03G40190
Oryza brachyantha
OB03G40190
N
0.727
BRADI1G09660
Brachypodium distachyon
BRADI1G09660
N
0.727
Lus10032337.g
Linum usitatissimum
Lus10032337.g
N
0.727
OS03G0733400
Oryza sativa
OS03G0733400
N
0.705
ORGLA05G0236800
Oryza glaberrima
ORGLA05G0236800
N
0.705
ORGLA03G0300400
Oryza glaberrima
ORGLA03G0300400
N
0.705
BGIOSGA018468
Oryza indica
BGIOSGA018468
N
0.705
BGIOSGA020445
Oryza indica
BGIOSGA020445
N
0.705
BGIOSGA009862
Oryza indica
BGIOSGA009862
N
0.705
ORGLA05G0072400
Oryza glaberrima
ORGLA05G0072400
N
0.705