TCM_032128 (Theobroma cacao)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 TCM_032128 T027757_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY13523 BED ZF 17 66
EOY13524 BED ZF 17 66
EOY13525 BED ZF 17 66
EOY13526 BED ZF 17 66
EOY13527 BED ZF 17 66
EOY13528 BED ZF 17 66

Links

Other BED ZF family TFs
Other Theobroma cacao TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cucsa.057910 Cucumis sativus Cucsa.057910 N 0.977
PRUPE_ppa002416mg Prunus persica PRUPE_ppa002416mg N 0.955
Pm011252 Prunus mume Pm011252 N 0.955
Gorai.007G331900 Gossypium raimondii Gorai.007G331900 N 0.955
GLYMA15G27362 Glycine max GLYMA15G27362 N 0.955
GLYMA09G15135 Glycine max GLYMA09G15135 N 0.955
VIT_19s0014g00320 Vitis vinifera VIT_19s0014g00320 N 0.932
Solyc10g007470.2 Solanum lycopersicum Solyc10g007470.2 N 0.932
POPTR_0011s10500 Populus trichocarpa POPTR_0011s10500 N 0.932
PK12364.1 Cannabis sativa PK12364.1 N 0.932
PGSC0003DMG400021296 Solanum tuberosum PGSC0003DMG400021296 N 0.932
Lus10005558.g Linum usitatissimum Lus10005558.g N 0.932
gene27341-v1.0-hybrid Fragaria vesca gene27341-v1.0-hybrid N 0.932
SapurV1A.0026s0130 Salix purpurea SapurV1A.0026s0130 N 0.909
SapurV1A.0020s0660 Salix purpurea SapurV1A.0020s0660 N 0.909
POPTR_0001s39240 Populus trichocarpa POPTR_0001s39240 N 0.909
Gorai.004G271300 Gossypium raimondii Gorai.004G271300 N 0.886
cassava7664.valid.m1 Manihot esculenta cassava7664.valid.m1 N 0.841
cassava7665.valid.m1 Manihot esculenta cassava7665.valid.m1 N 0.841
Bo1g129970 Brassica oleracea Bo1g129970 N 0.818
Thhalv10020233m.g Eutrema salsugineum Thhalv10020233m.g N 0.818
Carubv10013145m.g Capsella rubella Carubv10013145m.g N 0.818
Cagra.0007s0024 Capsella grandiflora Cagra.0007s0024 N 0.818
Bostr.28625s0227 Boechera stricta Bostr.28625s0227 N 0.818
Bo9g044150 Brassica oleracea Bo9g044150 N 0.773
gene24495-v1.0-hybrid Fragaria vesca gene24495-v1.0-hybrid N 0.714
Pm014562 Prunus mume Pm014562 N 0.714
PRUPE_ppa002590mg Prunus persica PRUPE_ppa002590mg N 0.714
Aquca_039_00001 Aquilegia coerulea Aquca_039_00001 N 0.705