TCM_038144 (Theobroma cacao)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 TCM_038144 T027760_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY31153 BED ZF 74 125
EOY31154 BED ZF 36 87
EOY31155 BED ZF 36 87
EOY31156 BED ZF 36 87

Links

Other BED ZF family TFs
Other Theobroma cacao TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.955
Gorai.004G107300 Gossypium raimondii Gorai.004G107300 N 0.955
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.955
mgf025287m Mimulus guttatus mgf025287m N 0.955
PK27100.1 Cannabis sativa PK27100.1 N 0.955
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N 0.932
GLYMA13G22855 Glycine max GLYMA13G22855 N 0.932
GLYMA13G22881 Glycine max GLYMA13G22881 N 0.932
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N 0.932
VIT_11s0016g05750 Vitis vinifera VIT_11s0016g05750 N 0.932
Gorai.010G061500 Gossypium raimondii Gorai.010G061500 N 0.909
Gorai.010G061600 Gossypium raimondii Gorai.010G061600 N 0.909
MDP0000394762 Malus domestica MDP0000394762 N 0.909
GLYMA17G11981 Glycine max GLYMA17G11981 N 0.909
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N 0.886
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N 0.886
MDP0000197332 Malus domestica MDP0000197332 N 0.864
Cucsa.036140 Cucumis sativus Cucsa.036140 N 0.864
POPTR_0018s12690 Populus trichocarpa POPTR_0018s12690 N 0.864
SapurV1A.0034s0250 Salix purpurea SapurV1A.0034s0250 N 0.864
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N 0.864
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N 0.864
POPTR_0004s12760 Populus trichocarpa POPTR_0004s12760 N 0.860
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N 0.841
PGSC0003DMG400023690 Solanum tuberosum PGSC0003DMG400023690 N 0.841
POPTR_0001s20900 Populus trichocarpa POPTR_0001s20900 N 0.841
cassava11655.m1 Manihot esculenta cassava11655.m1 N 0.841
POPTR_0003s02610 Populus trichocarpa POPTR_0003s02610 N 0.841
SapurV1A.0199s0250 Salix purpurea SapurV1A.0199s0250 N 0.841
SapurV1A.0344s0280 Salix purpurea SapurV1A.0344s0280 N 0.841
POPTR_0004s12810 Populus trichocarpa POPTR_0004s12810 N 0.837
fgenesh1_pm.C_scaffold_5000603 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5000603 N 0.818
Thhalv10002435m.g Eutrema salsugineum Thhalv10002435m.g N 0.818
VIT_09s0002g07340 Vitis vinifera VIT_09s0002g07340 N 0.818
Bo4g137780 Brassica oleracea Bo4g137780 N 0.818
Cagra.13611s0003 Capsella grandiflora Cagra.13611s0003 N 0.818
Carubv10008021m.g Capsella rubella Carubv10008021m.g N 0.818
PGSC0003DMG400019816 Solanum tuberosum PGSC0003DMG400019816 N 0.795
gene15718-v1.0-hybrid Fragaria vesca gene15718-v1.0-hybrid N 0.795
Ciclev10025036m.g Citrus clementina Ciclev10025036m.g N 0.795
Pm013703 Prunus mume Pm013703 N 0.795
Solyc03g116840.1 Solanum lycopersicum Solyc03g116840.1 N 0.795
GSMUA_Achr3G16690_001 Musa acuminata GSMUA_Achr3G16690_001 N 0.795
PRUPE_ppa002495mg Prunus persica PRUPE_ppa002495mg N 0.795
GSMUA_Achr8G29120_001 Musa acuminata GSMUA_Achr8G29120_001 N 0.795
POPTR_0018s12680 Populus trichocarpa POPTR_0018s12680 N 0.795
orange1.1g005485m.g Citrus sinensis orange1.1g005485m.g N 0.795
MLOC_75540 Hordeum vulgare MLOC_75540 N 0.773
SapurV1A.0197s0170 Salix purpurea SapurV1A.0197s0170 N 0.773
OB08G27850 Oryza brachyantha OB08G27850 N 0.773
Traes_4DS_990D31BB1 Triticum aestivum Traes_4DS_990D31BB1 N 0.773
Eucgr.F03885 Eucalyptus grandis Eucgr.F03885 N 0.773
Lus10032337.g Linum usitatissimum Lus10032337.g N 0.773
Traes_4BS_D5227ED8B Triticum aestivum Traes_4BS_D5227ED8B N 0.773
Sb02g043380 Sorghum bicolor Sb02g043380 N 0.773
Traes_4AL_54F25AA7C Triticum aestivum Traes_4AL_54F25AA7C N 0.773
Cagra.1725s0137 Capsella grandiflora Cagra.1725s0137 N 0.750
Pavir.J05554 Panicum virgatum Pavir.J05554 N 0.750
Pavir.Eb00995 Panicum virgatum Pavir.Eb00995 N 0.750
Gorai.010G137500 Gossypium raimondii Gorai.010G137500 N 0.750
Pavir.Eb00997 Panicum virgatum Pavir.Eb00997 N 0.750
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N 0.750
Pavir.J31170 Panicum virgatum Pavir.J31170 N 0.750
Carubv10019720m.g Capsella rubella Carubv10019720m.g N 0.750
Traes_4AL_A494372EB Triticum aestivum Traes_4AL_A494372EB N 0.750
Sb01g009090 Sorghum bicolor Sb01g009090 N 0.750
Si034159m.g Setaria italica Si034159m.g N 0.750
OB08G27840 Oryza brachyantha OB08G27840 N 0.750
MLOC_66012 Hordeum vulgare MLOC_66012 N 0.750
GSMUA_Achr3G02770_001 Musa acuminata GSMUA_Achr3G02770_001 N 0.750
BRADI3G40810 Brachypodium distachyon BRADI3G40810 N 0.750
TCM_027266 Theobroma cacao TCM_027266 N 0.750
Si000431m.g Setaria italica Si000431m.g N 0.750
Traes_4BS_5B1737D7C Triticum aestivum Traes_4BS_5B1737D7C N 0.750
Traes_4DS_9C5CECE46 Triticum aestivum Traes_4DS_9C5CECE46 N 0.750
HAT Arabidopsis thaliana AT3G42170 N 0.744
Bostr.0556s0643 Boechera stricta Bostr.0556s0643 N 0.744
Bostr.20129s0513 Boechera stricta Bostr.20129s0513 N 0.727
Pavir.Ea02468 Panicum virgatum Pavir.Ea02468 N 0.727
Si000761m.g Setaria italica Si000761m.g N 0.727
Bo4g107870 Brassica oleracea Bo4g107870 N 0.727
gene31106-v1.0-hybrid Fragaria vesca gene31106-v1.0-hybrid N 0.721
Thhalv10022530m.g Eutrema salsugineum Thhalv10022530m.g N 0.705
BGIOSGA009862 Oryza indica BGIOSGA009862 N 0.705
GLYMA07G03280 Glycine max GLYMA07G03280 N 0.705
BRADI1G09650 Brachypodium distachyon BRADI1G09650 N 0.705
Pavir.Ib03527 Panicum virgatum Pavir.Ib03527 N 0.705
BGIOSGA020445 Oryza indica BGIOSGA020445 N 0.705
BGIOSGA018468 Oryza indica BGIOSGA018468 N 0.705
BRADI1G09660 Brachypodium distachyon BRADI1G09660 N 0.705
ORGLA03G0300400 Oryza glaberrima ORGLA03G0300400 N 0.705
OS03G0733400 Oryza sativa OS03G0733400 N 0.705
Traes_6AS_2B943BE9C Triticum aestivum Traes_6AS_2B943BE9C N 0.705
Traes_6DS_FC6D9CA6B Triticum aestivum Traes_6DS_FC6D9CA6B N 0.705
TRIUR3_10927 Triticum urartu TRIUR3_10927 N 0.705
ORGLA05G0236800 Oryza glaberrima ORGLA05G0236800 N 0.705
ORGLA05G0072400 Oryza glaberrima ORGLA05G0072400 N 0.705
Pavir.Eb01402 Panicum virgatum Pavir.Eb01402 N 0.705
MLOC_42818 Hordeum vulgare MLOC_42818 N 0.705
OB03G40190 Oryza brachyantha OB03G40190 N 0.705
GSMUA_Achr10G16260_001 Musa acuminata GSMUA_Achr10G16260_001 N 0.705