VIT_05s0020g00790 (Vitis vinifera)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 VIT_05s0020g00790 T027885_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_05s0020g00790.t01 BED ZF 15 62
VIT_05s0020g00790.t01 BED ZF 140 186

Links

Other BED ZF family TFs
Other Vitis vinifera TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10013083m.g Capsella rubella Carubv10013083m.g N 0.976
Thhalv10020031m.g Eutrema salsugineum Thhalv10020031m.g N 0.976
Cagra.4396s0051 Capsella grandiflora Cagra.4396s0051 N 0.976
Bostr.19424s0919 Boechera stricta Bostr.19424s0919 N 0.976
GLYMA09G09291 Glycine max GLYMA09G09291 N 0.964
AT3G17450 Arabidopsis thaliana AT3G17450 N 0.952
29889.m003394 Ricinus communis 29889.m003394 N 0.952
GLYMA15G21351 Glycine max GLYMA15G21351 N 0.952
LjT35D18.120.nc Lotus japonicus LjT35D18.120.nc N 0.952
TCM_021492 Theobroma cacao TCM_021492 N 0.940
GSMUA_Achr3G12820_001 Musa acuminata GSMUA_Achr3G12820_001 N 0.928
Bo00763s120 Brassica oleracea Bo00763s120 N 0.926
Cucsa.252180 Cucumis sativus Cucsa.252180 N 0.917
Pm008491 Prunus mume Pm008491 N 0.916
PRUPE_ppa001126mg Prunus persica PRUPE_ppa001126mg N 0.916
MDP0000314867 Malus domestica MDP0000314867 N 0.905
MDP0000133479 Malus domestica MDP0000133479 N 0.905
orange1.1g044693m.g Citrus sinensis orange1.1g044693m.g N 0.904
PK21594.1 Cannabis sativa PK21594.1 N 0.904
Ciclev10024195m.g Citrus clementina Ciclev10024195m.g N 0.904
Aquca_029_00055 Aquilegia coerulea Aquca_029_00055 N 0.904
TCM_004927 Theobroma cacao TCM_004927 N 0.904
POPTR_0014s10940 Populus trichocarpa POPTR_0014s10940 N 0.904
SapurV1A.0294s0300 Salix purpurea SapurV1A.0294s0300 N 0.904
cassava36089.valid.m1 Manihot esculenta cassava36089.valid.m1 N 0.892
gene22812-v1.0-hybrid Fragaria vesca gene22812-v1.0-hybrid N 0.881
evm.TU.supercontig_519.2 Carica papaya evm.TU.supercontig_519.2 N 0.880
SapurV1A.0014s0420 Salix purpurea SapurV1A.0014s0420 N 0.880
Eucgr.B02527 Eucalyptus grandis Eucgr.B02527 N 0.869
POPTR_0002s18950 Populus trichocarpa POPTR_0002s18950 N 0.869
Gorai.008G135400 Gossypium raimondii Gorai.008G135400 N 0.867