bed-3 (Caenorhabditis elegans)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 WBGene00009133 T027895_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bed-3
M00587_2.00		 Caenorhabditis elegans
TCGRGANY
RNTCYCGA		 PBM
Narasimhan et al.(2015)
pTH9056		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00587_2.00 BED ZF 51 95

DNA Binding Domains

Protein ID Domain From To Sequence
F25H8.6 BED ZF 126 170

Links

Other BED ZF family TFs
Other Caenorhabditis elegans TFs

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39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action