bed-3 (Caenorhabditis elegans)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 WBGene00009133 T027895_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bed-3
M00587_2.00
Caenorhabditis elegans
TCGRGANY

RNTCYCGA
PBM
Narasimhan et al.(2015)
pTH9056
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00587_2.00 BED ZF 51 95

DNA Binding Domains

Protein ID Domain From To Sequence
F25H8.6 BED ZF 126 170

Links

Other BED ZF family TFs
Other Caenorhabditis elegans TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HDID_0000541001 Hymenolepis diminuta HDID_0000541001 N 0.000
HNAJ_0000956701 Hymenolepis nana HNAJ_0000956701 N 0.000