Alligator_sinensis_CCG002099.1 (Alligator sinensis)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Alligator_sinensis_CCG002099.1 T027947_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG002099.1 BED ZF 258 290

Links

Other BED ZF family TFs
Other Alligator sinensis TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPSIG00000013671 Pelodiscus sinensis ENSPSIG00000013671 N 0.970
Pvit_02550 Pogona vitticeps Pvit_02550 N 0.939
SGSM2 Anolis carolinensis ENSACAG00000011801 N 0.939
Ogr16274 Ophisaurus gracilis Ogr16274 N 0.939
SGSM2 Gallus gallus ENSGALG00000005737 N 0.879
Aan_R004292 Calypte anna Aan_R004292 N 0.875
ENSSHAG00000011609 Sarcophilus harrisii ENSSHAG00000011609 N 0.862
SGSM2 Monodelphis domestica ENSMODG00000010704 N 0.862
SGSM2 Meleagris gallopavo ENSMGAG00000008568 N 0.833
SGSM2 Ornithorhynchus anatinus ENSOANG00000008634 N 0.833
ENSMEUG00000015853 Macropus eugenii ENSMEUG00000015853 N 0.828
Gfo_R012738 Geospiza fortis Gfo_R012738 N 0.806
SGSM2 Sus scrofa ENSSSCG00000017829 N 0.800
ENSSTOG00000011842 Ictidomys tridecemlineatus ENSSTOG00000011842 N 0.800
SGSM2 Pteropus vampyrus ENSPVAG00000002165 N 0.800
Sgsm2 Mus musculus ENSMUSG00000038351 N 0.800
SGSM2 Equus caballus ENSECAG00000010959 N 0.800
SGSM2 Loxodonta africana ENSLAFG00000014571 N 0.800
ENSMPUG00000012881 Mustela putorius furo ENSMPUG00000012881 N 0.800
SGSM2 Callithrix jacchus ENSCJAG00000012412 N 0.794
ENSLACG00000018073 Latimeria chalumnae ENSLACG00000018073 N 0.793
ENSMMUG00000022002 Macaca mulatta ENSMMUG00000022002 N 0.767
ENSCSAG00000013779 Chlorocebus sabaeus ENSCSAG00000013779 N 0.767
ENSNLEG00000017189 Nomascus leucogenys ENSNLEG00000017189 N 0.767
sgsm2 Xenopus tropicalis XB-GENE-6050632 N 0.767
ENSPPYG00000007793 Pongo abelii ENSPPYG00000007793 N 0.767
SGSM2 Homo sapiens ENSG00000141258 N 0.767
SGSM2 Gorilla gorilla ENSGGOG00000002449 N 0.767
SGSM2 Pan troglodytes ENSPTRG00000008548 N 0.767
ENSPANG00000024465 Papio anubis ENSPANG00000024465 N 0.767
ENSONIG00000010511 Oreochromis niloticus ENSONIG00000010511 N 0.735
ENSGMOG00000009038 Gadus morhua ENSGMOG00000009038 N 0.735
SGSM2 Taeniopygia guttata ENSTGUG00000008737 N 0.710
ENSFALG00000004762 Ficedula albicollis ENSFALG00000004762 N 0.710