CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R008679
(
Geospiza fortis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Gfo_R008679
T028000_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R008679
BED ZF
116
164
SPAWNHFFISPRDSTKAICMYCMKEFSRGKNEKDLSTSCLMRHVRRAHP
Gfo_R008679
BED ZF
285
333
SAVWKHFYLSPLDNSKAVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHR
Gfo_R008679
BED ZF
456
503
SEVWHHFSLSPADSLKAVCRYCSCMISRGKKGDVGTSCLMRHLYRRHP
Gfo_R008679
BED ZF
558
606
SKLWNHFSICSADSTKVICTHCGRIISRGKKPTNLGTSCLLRHLQRFHN
Links
Other
BED ZF
family TFs
Other
Geospiza fortis
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy