Pm013703 (Prunus mume)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pm013703 T028027_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm013703 BED ZF 28 85

Links

Other BED ZF family TFs
Other Prunus mume TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PRUPE_ppa002495mg Prunus persica PRUPE_ppa002495mg N 1.000
gene15718-v1.0-hybrid Fragaria vesca gene15718-v1.0-hybrid N 0.864
POPTR_0003s02610 Populus trichocarpa POPTR_0003s02610 N 0.864
POPTR_0001s20900 Populus trichocarpa POPTR_0001s20900 N 0.864
VIT_09s0002g07340 Vitis vinifera VIT_09s0002g07340 N 0.864
Carubv10019720m.g Capsella rubella Carubv10019720m.g N 0.864
SapurV1A.0344s0280 Salix purpurea SapurV1A.0344s0280 N 0.864
SapurV1A.0199s0250 Salix purpurea SapurV1A.0199s0250 N 0.864
cassava11655.m1 Manihot esculenta cassava11655.m1 N 0.864
Cagra.1725s0137 Capsella grandiflora Cagra.1725s0137 N 0.864
Bostr.20129s0513 Boechera stricta Bostr.20129s0513 N 0.841
Eucgr.F03885 Eucalyptus grandis Eucgr.F03885 N 0.841
Bo4g107870 Brassica oleracea Bo4g107870 N 0.818
orange1.1g005485m.g Citrus sinensis orange1.1g005485m.g N 0.818
Solyc03g116840.1 Solanum lycopersicum Solyc03g116840.1 N 0.818
PGSC0003DMG400019816 Solanum tuberosum PGSC0003DMG400019816 N 0.818
Ciclev10025036m.g Citrus clementina Ciclev10025036m.g N 0.818
TCM_038144 Theobroma cacao TCM_038144 N 0.795
mgf025287m Mimulus guttatus mgf025287m N 0.795
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.795
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.795
PK27100.1 Cannabis sativa PK27100.1 N 0.795
POPTR_0004s12760 Populus trichocarpa POPTR_0004s12760 N 0.791
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N 0.773
TCM_027266 Theobroma cacao TCM_027266 N 0.773
Gorai.010G137500 Gossypium raimondii Gorai.010G137500 N 0.773
VIT_11s0016g05750 Vitis vinifera VIT_11s0016g05750 N 0.773
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N 0.773
GLYMA13G22881 Glycine max GLYMA13G22881 N 0.773
GLYMA13G22855 Glycine max GLYMA13G22855 N 0.773
GLYMA07G03280 Glycine max GLYMA07G03280 N 0.773
POPTR_0004s12810 Populus trichocarpa POPTR_0004s12810 N 0.767
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N 0.750
Gorai.004G107300 Gossypium raimondii Gorai.004G107300 N 0.750
MDP0000394762 Malus domestica MDP0000394762 N 0.750
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N 0.750
GLYMA17G11981 Glycine max GLYMA17G11981 N 0.750
SapurV1A.0197s0170 Salix purpurea SapurV1A.0197s0170 N 0.750
Thhalv10022530m.g Eutrema salsugineum Thhalv10022530m.g N 0.750
Bo6g067130 Brassica oleracea Bo6g067130 N 0.750
Gorai.010G061500 Gossypium raimondii Gorai.010G061500 N 0.727
PK28412.1 Cannabis sativa PK28412.1 N 0.727
Gorai.010G061600 Gossypium raimondii Gorai.010G061600 N 0.727
SapurV1A.0034s0250 Salix purpurea SapurV1A.0034s0250 N 0.727
GSMUA_Achr3G16690_001 Musa acuminata GSMUA_Achr3G16690_001 N 0.727
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N 0.727
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N 0.727
Cucsa.036140 Cucumis sativus Cucsa.036140 N 0.727
Traes_4BS_D5227ED8B Triticum aestivum Traes_4BS_D5227ED8B N 0.727
GSMUA_Achr8G29120_001 Musa acuminata GSMUA_Achr8G29120_001 N 0.727
Traes_4DS_990D31BB1 Triticum aestivum Traes_4DS_990D31BB1 N 0.727
Cucsa.096030 Cucumis sativus Cucsa.096030 N 0.727
Sb02g043380 Sorghum bicolor Sb02g043380 N 0.727
MLOC_75540 Hordeum vulgare MLOC_75540 N 0.727
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N 0.727
PGSC0003DMG400023690 Solanum tuberosum PGSC0003DMG400023690 N 0.727
POPTR_0018s12690 Populus trichocarpa POPTR_0018s12690 N 0.727
Traes_4AL_54F25AA7C Triticum aestivum Traes_4AL_54F25AA7C N 0.727
Si000761m.g Setaria italica Si000761m.g N 0.705
Si034159m.g Setaria italica Si034159m.g N 0.705
Si000431m.g Setaria italica Si000431m.g N 0.705
Pavir.Eb00997 Panicum virgatum Pavir.Eb00997 N 0.705
MDP0000197332 Malus domestica MDP0000197332 N 0.705
OB08G27840 Oryza brachyantha OB08G27840 N 0.705
Pavir.Eb00995 Panicum virgatum Pavir.Eb00995 N 0.705
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N 0.705
Pavir.J05554 Panicum virgatum Pavir.J05554 N 0.705
Pavir.J31170 Panicum virgatum Pavir.J31170 N 0.705