CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_16876
(
Pogona vitticeps
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pvit_16876
T028048_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_16876
BED ZF
179
220
SKVWNYYTKLGDAYVECNVCKKQLSFHNSTTTMREHLVRKHS
Links
Other
BED ZF
family TFs
Other
Pogona vitticeps
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10021413
Chelonia mydas
Cmyd_10021413
N
1.000
ENSACAG00000029056
Anolis carolinensis
ENSACAG00000029056
N
0.929
ENSLACG00000013293
Latimeria chalumnae
ENSLACG00000013293
N
0.857
si:dkeyp-117b8.4
Danio rerio
ENSDARG00000094214
N
0.762
ENSAMXG00000013722
Astyanax mexicanus
ENSAMXG00000013722
N
0.738