Cucsa.036140 (Cucumis sativus)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Cucsa.036140 T028079_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.036140.1 BED ZF 161 212

Links

Other BED ZF family TFs
Other Cucumis sativus TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.909
VIT_11s0016g05750 Vitis vinifera VIT_11s0016g05750 N 0.909
mgf025287m Mimulus guttatus mgf025287m N 0.909
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.909
PK27100.1 Cannabis sativa PK27100.1 N 0.909
POPTR_0004s12760 Populus trichocarpa POPTR_0004s12760 N 0.907
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N 0.886
MDP0000394762 Malus domestica MDP0000394762 N 0.886
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N 0.886
GLYMA13G22881 Glycine max GLYMA13G22881 N 0.886
GLYMA13G22855 Glycine max GLYMA13G22855 N 0.886
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N 0.864
GLYMA17G11981 Glycine max GLYMA17G11981 N 0.864
Gorai.010G061500 Gossypium raimondii Gorai.010G061500 N 0.864
TCM_038144 Theobroma cacao TCM_038144 N 0.864
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N 0.864
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N 0.864
POPTR_0018s12690 Populus trichocarpa POPTR_0018s12690 N 0.864
Gorai.010G061600 Gossypium raimondii Gorai.010G061600 N 0.864
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N 0.864
SapurV1A.0034s0250 Salix purpurea SapurV1A.0034s0250 N 0.864
POPTR_0004s12810 Populus trichocarpa POPTR_0004s12810 N 0.860
Cagra.13611s0003 Capsella grandiflora Cagra.13611s0003 N 0.841
POPTR_0018s12680 Populus trichocarpa POPTR_0018s12680 N 0.841
Carubv10008021m.g Capsella rubella Carubv10008021m.g N 0.841
MDP0000197332 Malus domestica MDP0000197332 N 0.841
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N 0.818
fgenesh1_pm.C_scaffold_5000603 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5000603 N 0.818
Gorai.004G107300 Gossypium raimondii Gorai.004G107300 N 0.818
PGSC0003DMG400023690 Solanum tuberosum PGSC0003DMG400023690 N 0.818
Bo4g137780 Brassica oleracea Bo4g137780 N 0.795
SapurV1A.0199s0250 Salix purpurea SapurV1A.0199s0250 N 0.795
SapurV1A.0344s0280 Salix purpurea SapurV1A.0344s0280 N 0.795
cassava11655.m1 Manihot esculenta cassava11655.m1 N 0.795
SapurV1A.0197s0170 Salix purpurea SapurV1A.0197s0170 N 0.795
POPTR_0003s02610 Populus trichocarpa POPTR_0003s02610 N 0.795
Lus10032337.g Linum usitatissimum Lus10032337.g N 0.795
PGSC0003DMG400019816 Solanum tuberosum PGSC0003DMG400019816 N 0.795
POPTR_0001s20900 Populus trichocarpa POPTR_0001s20900 N 0.795
Solyc03g116840.1 Solanum lycopersicum Solyc03g116840.1 N 0.795
VIT_09s0002g07340 Vitis vinifera VIT_09s0002g07340 N 0.773
Thhalv10002435m.g Eutrema salsugineum Thhalv10002435m.g N 0.773
Bostr.0556s0643 Boechera stricta Bostr.0556s0643 N 0.767
HAT Arabidopsis thaliana AT3G42170 N 0.767
GSMUA_Achr3G02770_001 Musa acuminata GSMUA_Achr3G02770_001 N 0.762
GSMUA_Achr8G29120_001 Musa acuminata GSMUA_Achr8G29120_001 N 0.750
GSMUA_Achr3G16690_001 Musa acuminata GSMUA_Achr3G16690_001 N 0.750
gene15718-v1.0-hybrid Fragaria vesca gene15718-v1.0-hybrid N 0.750
gene31106-v1.0-hybrid Fragaria vesca gene31106-v1.0-hybrid N 0.744
Eucgr.F03885 Eucalyptus grandis Eucgr.F03885 N 0.727
Traes_4BS_D5227ED8B Triticum aestivum Traes_4BS_D5227ED8B N 0.727
Sb02g043380 Sorghum bicolor Sb02g043380 N 0.727
OB08G27850 Oryza brachyantha OB08G27850 N 0.727
MLOC_75540 Hordeum vulgare MLOC_75540 N 0.727
GLYMA16G32921 Glycine max GLYMA16G32921 N 0.727
Traes_4AL_54F25AA7C Triticum aestivum Traes_4AL_54F25AA7C N 0.727
PRUPE_ppa002495mg Prunus persica PRUPE_ppa002495mg N 0.727
Traes_4DS_990D31BB1 Triticum aestivum Traes_4DS_990D31BB1 N 0.727
Pm013703 Prunus mume Pm013703 N 0.727
Pavir.J31170 Panicum virgatum Pavir.J31170 N 0.705
Pavir.J05554 Panicum virgatum Pavir.J05554 N 0.705
OB08G27840 Oryza brachyantha OB08G27840 N 0.705
MLOC_66012 Hordeum vulgare MLOC_66012 N 0.705
PK28412.1 Cannabis sativa PK28412.1 N 0.705
BRADI3G40810 Brachypodium distachyon BRADI3G40810 N 0.705
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N 0.705
Traes_4DS_9C5CECE46 Triticum aestivum Traes_4DS_9C5CECE46 N 0.705
Pavir.Eb00997 Panicum virgatum Pavir.Eb00997 N 0.705
Si000431m.g Setaria italica Si000431m.g N 0.705
Gorai.010G137500 Gossypium raimondii Gorai.010G137500 N 0.705
Si034159m.g Setaria italica Si034159m.g N 0.705
TCM_027266 Theobroma cacao TCM_027266 N 0.705
Traes_4BS_5B1737D7C Triticum aestivum Traes_4BS_5B1737D7C N 0.705
Sb01g009090 Sorghum bicolor Sb01g009090 N 0.705
Pavir.Eb00995 Panicum virgatum Pavir.Eb00995 N 0.705
orange1.1g005485m.g Citrus sinensis orange1.1g005485m.g N 0.705
Ciclev10025036m.g Citrus clementina Ciclev10025036m.g N 0.705
Traes_4AL_A494372EB Triticum aestivum Traes_4AL_A494372EB N 0.705