Cucsa.252180 (Cucumis sativus)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Cucsa.252180 T028086_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.252180.1 BED ZF 12 59
Cucsa.252180.1 BED ZF 136 185

Links

Other BED ZF family TFs
Other Cucumis sativus TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000314867 Malus domestica MDP0000314867 N 0.964
MDP0000133479 Malus domestica MDP0000133479 N 0.964
Pm008491 Prunus mume Pm008491 N 0.952
PK21594.1 Cannabis sativa PK21594.1 N 0.952
PRUPE_ppa001126mg Prunus persica PRUPE_ppa001126mg N 0.952
gene22812-v1.0-hybrid Fragaria vesca gene22812-v1.0-hybrid N 0.940
VIT_05s0020g00790 Vitis vinifera VIT_05s0020g00790 N 0.917
Cagra.4396s0051 Capsella grandiflora Cagra.4396s0051 N 0.917
Thhalv10020031m.g Eutrema salsugineum Thhalv10020031m.g N 0.917
Carubv10013083m.g Capsella rubella Carubv10013083m.g N 0.917
Bostr.19424s0919 Boechera stricta Bostr.19424s0919 N 0.917
TCM_021492 Theobroma cacao TCM_021492 N 0.905
GSMUA_Achr3G12820_001 Musa acuminata GSMUA_Achr3G12820_001 N 0.905
Bo00763s120 Brassica oleracea Bo00763s120 N 0.901
29889.m003394 Ricinus communis 29889.m003394 N 0.893
AT3G17450 Arabidopsis thaliana AT3G17450 N 0.893
GLYMA15G21351 Glycine max GLYMA15G21351 N 0.881
GLYMA09G09291 Glycine max GLYMA09G09291 N 0.881
LjT35D18.120.nc Lotus japonicus LjT35D18.120.nc N 0.869
Aquca_029_00055 Aquilegia coerulea Aquca_029_00055 N 0.845
orange1.1g044693m.g Citrus sinensis orange1.1g044693m.g N 0.833
SapurV1A.0294s0300 Salix purpurea SapurV1A.0294s0300 N 0.833
evm.TU.supercontig_519.2 Carica papaya evm.TU.supercontig_519.2 N 0.833
TCM_004927 Theobroma cacao TCM_004927 N 0.833
POPTR_0014s10940 Populus trichocarpa POPTR_0014s10940 N 0.833
cassava36089.valid.m1 Manihot esculenta cassava36089.valid.m1 N 0.833
Ciclev10024195m.g Citrus clementina Ciclev10024195m.g N 0.833
Eucgr.B02527 Eucalyptus grandis Eucgr.B02527 N 0.821
SapurV1A.0014s0420 Salix purpurea SapurV1A.0014s0420 N 0.810
POPTR_0002s18950 Populus trichocarpa POPTR_0002s18950 N 0.810
Gorai.008G135400 Gossypium raimondii Gorai.008G135400 N 0.810