CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_chr_2.1000920
(
Pichia stipitis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
fgenesh1_pg.C_chr_2.1000920
T028093_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_chr_2.1000920
BED ZF
98
144
SWVWSWFVQDNSDPNIAACDYCGKIIIRLASDKGSPKKLSEHLRTHK
Links
Other
BED ZF
family TFs
Other
Pichia stipitis
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PICST_30244
Scheffersomyces stipitis
PICST_30244
N
1.000
DEHA2F12760g
Debaryomyces hansenii
DEHA2F12760g
N
0.905
GNLVRS01_PISO0I10656g
Millerozyma farinosa
GNLVRS01_PISO0I10656g
N
0.857
GNLVRS01_PISO0J12461g
Millerozyma farinosa
GNLVRS01_PISO0J12461g
N
0.857
PGUG_00911
Meyerozyma guilliermondii
PGUG_00911
N
0.833
CLUG_01116
Candida lusitaniae
CLUG_01116
N
0.833
CTRG_03329
Candida tropicalis
CTRG_03329
N
0.833
CLUG_01116
Clavispora lusitaniae
CLUG_01116
N
0.833
PGUG_00911
Candida guilliermondii
PGUG_00911
N
0.833
CANTEDRAFT_95109
Candida tenuis
CANTEDRAFT_95109
N
0.810
XP_002492476.1
Pichia pastoris
XP_002492476.1
N
0.810
SPAPADRAFT_142226
Spathaspora passalidarum
SPAPADRAFT_142226
N
0.810
PAS_chr3_0260
Komagataella pastoris
PAS_chr3_0260
N
0.810
G210_5515
Candida maltosa
G210_5515
N
0.786
CD36_09800
Candida dubliniensis
CD36_09800
N
0.786
KUCA_T00001191001
Kuraishia capsulata
KUCA_T00001191001
N
0.762
CaO19.12377
Candida albicans
CaO19.12377
N
0.738
LELG_00673
Lodderomyces elongisporus
LELG_00673
N
0.738
CaO19.4911
Candida albicans
CaO19.4911
N
0.738