CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.19424s0919
(
Boechera stricta
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Bostr.19424s0919
T028185_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.19424s0919.1.p
BED ZF
11
58
DPGWEHGVAQDERKKKVKCNYCGKIVSGGIYRLKQHLARVSGEVTYCD
Bostr.19424s0919.1.p
BED ZF
135
181
DPGWEHGVAQDERKKKVKCNYCNKIVSGGINRFKQHLARIPGEVAPC
Links
Other
BED ZF
family TFs
Other
Boechera stricta
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.4396s0051
Capsella grandiflora
Cagra.4396s0051
N
1.000
Carubv10013083m.g
Capsella rubella
Carubv10013083m.g
N
1.000
Thhalv10020031m.g
Eutrema salsugineum
Thhalv10020031m.g
N
1.000
VIT_05s0020g00790
Vitis vinifera
VIT_05s0020g00790
N
0.976
AT3G17450
Arabidopsis thaliana
AT3G17450
N
0.976
29889.m003394
Ricinus communis
29889.m003394
N
0.964
TCM_021492
Theobroma cacao
TCM_021492
N
0.940
GLYMA09G09291
Glycine max
GLYMA09G09291
N
0.940
GLYMA15G21351
Glycine max
GLYMA15G21351
N
0.939
Bo00763s120
Brassica oleracea
Bo00763s120
N
0.938
LjT35D18.120.nc
Lotus japonicus
LjT35D18.120.nc
N
0.928
GSMUA_Achr3G12820_001
Musa acuminata
GSMUA_Achr3G12820_001
N
0.917
Cucsa.252180
Cucumis sativus
Cucsa.252180
N
0.917
MDP0000314867
Malus domestica
MDP0000314867
N
0.905
MDP0000133479
Malus domestica
MDP0000133479
N
0.905
PRUPE_ppa001126mg
Prunus persica
PRUPE_ppa001126mg
N
0.893
Pm008491
Prunus mume
Pm008491
N
0.893
gene22812-v1.0-hybrid
Fragaria vesca
gene22812-v1.0-hybrid
N
0.881
Aquca_029_00055
Aquilegia coerulea
Aquca_029_00055
N
0.881
SapurV1A.0294s0300
Salix purpurea
SapurV1A.0294s0300
N
0.880
POPTR_0014s10940
Populus trichocarpa
POPTR_0014s10940
N
0.880
PK21594.1
Cannabis sativa
PK21594.1
N
0.869
orange1.1g044693m.g
Citrus sinensis
orange1.1g044693m.g
N
0.869
TCM_004927
Theobroma cacao
TCM_004927
N
0.869
Ciclev10024195m.g
Citrus clementina
Ciclev10024195m.g
N
0.869
evm.TU.supercontig_519.2
Carica papaya
evm.TU.supercontig_519.2
N
0.869
cassava36089.valid.m1
Manihot esculenta
cassava36089.valid.m1
N
0.857
SapurV1A.0014s0420
Salix purpurea
SapurV1A.0014s0420
N
0.855
POPTR_0002s18950
Populus trichocarpa
POPTR_0002s18950
N
0.845
Gorai.008G135400
Gossypium raimondii
Gorai.008G135400
N
0.845
Eucgr.B02527
Eucalyptus grandis
Eucgr.B02527
N
0.845