Carubv10008481m.g (Capsella rubella)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Carubv10008481m.g T028219_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10008481m BED ZF 55 97

Links

Other BED ZF family TFs
Other Capsella rubella TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
FRS8 Arabidopsis thaliana AT1G80010 N 0.000
Carubv10019873m.g Capsella rubella Carubv10019873m.g N 0.000
Eucgr.F03904 Eucalyptus grandis Eucgr.F03904 N 0.000
gene16000-v1.0-hybrid Fragaria vesca gene16000-v1.0-hybrid N 0.000
Gorai.006G101600 Gossypium raimondii Gorai.006G101600 N 0.000
MDP0000126939 Malus domestica MDP0000126939 N 0.000
SapurV1A.0199s0220 Salix purpurea SapurV1A.0199s0220 N 0.000
Thhalv10018210m.g Eutrema salsugineum Thhalv10018210m.g N 0.000
PK08039.1 Cannabis sativa PK08039.1 N 0.000
Cagra.1725s0138 Capsella grandiflora Cagra.1725s0138 N 0.000
Bostr.20129s0514 Boechera stricta Bostr.20129s0514 N 0.000
Bra003544 Brassica rapa Bra003544 N 0.000
GLYMA15G13160 Glycine max GLYMA15G13160 N 0.000
FRS8 Populus trichocarpa POPTR_0003s02550 N 0.000
PRUPE_ppa001906mg Prunus persica PRUPE_ppa001906mg N 0.000
Solyc06g068210.1 Solanum lycopersicum Solyc06g068210.1 N 0.000
TCM_027272 Theobroma cacao TCM_027272 N 0.000
cassava23820.valid.m1 Manihot esculenta cassava23820.valid.m1 N 0.000
Cucsa.096050 Cucumis sativus Cucsa.096050 N 0.000
chr6.CM0066.190.nc Lotus japonicus chr6.CM0066.190.nc N 0.000