CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_1.434
(
Carica papaya
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
evm.TU.supercontig_1.434
T028264_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_1.434
BED ZF
17
65
DPAWKHCLMYKNGDRIQLKCVYCGKMFKGGGIHRIKEHLAGHKGNASTC
Links
Other
BED ZF
family TFs
Other
Carica papaya
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30143.m001167
Ricinus communis
30143.m001167
N
0.881
gene26335-v1.0-hybrid
Fragaria vesca
gene26335-v1.0-hybrid
N
0.857
Lus10000517.g
Linum usitatissimum
Lus10000517.g
N
0.857
GLYMA18G04105
Glycine max
GLYMA18G04105
N
0.833
GLYMA11G34201
Glycine max
GLYMA11G34201
N
0.833
Gorai.013G021900
Gossypium raimondii
Gorai.013G021900
N
0.833
MDP0000276134
Malus domestica
MDP0000276134
N
0.833
MDP0000217734
Malus domestica
MDP0000217734
N
0.833
Aquca_009_00913
Aquilegia coerulea
Aquca_009_00913
N
0.791
TCM_002022
Theobroma cacao
TCM_002022
N
0.744
GSMUA_Achr9G03400_001
Musa acuminata
GSMUA_Achr9G03400_001
N
0.738
MLOC_64929
Hordeum vulgare
MLOC_64929
N
0.721
Traes_5BL_1FA8B5075
Triticum aestivum
Traes_5BL_1FA8B5075
N
0.721
Gorai.001G093000
Gossypium raimondii
Gorai.001G093000
N
0.718