gene24495-v1.0-hybrid (Fragaria vesca)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 gene24495-v1.0-hybrid T028299_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna24495.1-v1.0-hybrid BED ZF 584 631

Links

Other BED ZF family TFs
Other Fragaria vesca TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pm014562 Prunus mume Pm014562 N 0.976
PRUPE_ppa002590mg Prunus persica PRUPE_ppa002590mg N 0.976
GLYMA08G42321 Glycine max GLYMA08G42321 N 0.881
PK13949.1 Cannabis sativa PK13949.1 N 0.881
GLYMA18G12556 Glycine max GLYMA18G12556 N 0.881
Cucsa.185330 Cucumis sativus Cucsa.185330 N 0.857
VIT_12s0142g00390 Vitis vinifera VIT_12s0142g00390 N 0.833
Eucgr.K01194 Eucalyptus grandis Eucgr.K01194 N 0.833
cassava35563.valid.m1 Manihot esculenta cassava35563.valid.m1 N 0.810
Bostr.10273s0360 Boechera stricta Bostr.10273s0360 N 0.786
Cagra.10840s0006 Capsella grandiflora Cagra.10840s0006 N 0.786
Carubv10022346m.g Capsella rubella Carubv10022346m.g N 0.786
Gorai.012G042700 Gossypium raimondii Gorai.012G042700 N 0.786
cassava21091.m1 Manihot esculenta cassava21091.m1 N 0.786
PGSC0003DMG400021240 Solanum tuberosum PGSC0003DMG400021240 N 0.786
TCM_001836 Theobroma cacao TCM_001836 N 0.786
Solyc10g007810.2 Solanum lycopersicum Solyc10g007810.2 N 0.786
Thhalv10018229m.g Eutrema salsugineum Thhalv10018229m.g N 0.738
GLYMA15G27362 Glycine max GLYMA15G27362 N 0.738
SapurV1A.0020s0660 Salix purpurea SapurV1A.0020s0660 N 0.738
Solyc10g007470.2 Solanum lycopersicum Solyc10g007470.2 N 0.738
Gorai.007G331900 Gossypium raimondii Gorai.007G331900 N 0.738
GLYMA09G15135 Glycine max GLYMA09G15135 N 0.738
POPTR_0001s39240 Populus trichocarpa POPTR_0001s39240 N 0.738
PGSC0003DMG400021296 Solanum tuberosum PGSC0003DMG400021296 N 0.738
mgf000829m Mimulus guttatus mgf000829m N 0.738
POPTR_0011s10500 Populus trichocarpa POPTR_0011s10500 N 0.738
Bo6g110620 Brassica oleracea Bo6g110620 N 0.738
Lus10005558.g Linum usitatissimum Lus10005558.g N 0.714
PK12364.1 Cannabis sativa PK12364.1 N 0.714
Aquca_102_00001 Aquilegia coerulea Aquca_102_00001 N 0.714
TCM_032128 Theobroma cacao TCM_032128 N 0.714
Cucsa.057910 Cucumis sativus Cucsa.057910 N 0.714
gene27341-v1.0-hybrid Fragaria vesca gene27341-v1.0-hybrid N 0.714
Gorai.004G271300 Gossypium raimondii Gorai.004G271300 N 0.714