gene24495-v1.0-hybrid (Fragaria vesca)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 gene24495-v1.0-hybrid T028299_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna24495.1-v1.0-hybrid BED ZF 584 631

Links

Other BED ZF family TFs
Other Fragaria vesca TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_102_00001 Aquilegia coerulea Aquca_102_00001 N 0.714
Bo6g110620 Brassica oleracea Bo6g110620 N 0.738
Bostr.10273s0360 Boechera stricta Bostr.10273s0360 N 0.786
Cagra.10840s0006 Capsella grandiflora Cagra.10840s0006 N 0.786
Carubv10022346m.g Capsella rubella Carubv10022346m.g N 0.786
cassava21091.m1 Manihot esculenta cassava21091.m1 N 0.786
cassava35563.valid.m1 Manihot esculenta cassava35563.valid.m1 N 0.810
Cucsa.057910 Cucumis sativus Cucsa.057910 N 0.714
Cucsa.185330 Cucumis sativus Cucsa.185330 N 0.857
Eucgr.K01194 Eucalyptus grandis Eucgr.K01194 N 0.833
gene27341-v1.0-hybrid Fragaria vesca gene27341-v1.0-hybrid N 0.714
GLYMA08G42321 Glycine max GLYMA08G42321 N 0.881
GLYMA09G15135 Glycine max GLYMA09G15135 N 0.738
GLYMA15G27362 Glycine max GLYMA15G27362 N 0.738
GLYMA18G12556 Glycine max GLYMA18G12556 N 0.881
Gorai.004G271300 Gossypium raimondii Gorai.004G271300 N 0.714
Gorai.007G331900 Gossypium raimondii Gorai.007G331900 N 0.738
Gorai.012G042700 Gossypium raimondii Gorai.012G042700 N 0.786
Lus10005558.g Linum usitatissimum Lus10005558.g N 0.714
mgf000829m Mimulus guttatus mgf000829m N 0.738
PGSC0003DMG400021240 Solanum tuberosum PGSC0003DMG400021240 N 0.786
PGSC0003DMG400021296 Solanum tuberosum PGSC0003DMG400021296 N 0.738
PK12364.1 Cannabis sativa PK12364.1 N 0.714
PK13949.1 Cannabis sativa PK13949.1 N 0.881
Pm014562 Prunus mume Pm014562 N 0.976
POPTR_0001s39240 Populus trichocarpa POPTR_0001s39240 N 0.738
POPTR_0011s10500 Populus trichocarpa POPTR_0011s10500 N 0.738
PRUPE_ppa002590mg Prunus persica PRUPE_ppa002590mg N 0.976
SapurV1A.0020s0660 Salix purpurea SapurV1A.0020s0660 N 0.738
Solyc10g007470.2 Solanum lycopersicum Solyc10g007470.2 N 0.738
Solyc10g007810.2 Solanum lycopersicum Solyc10g007810.2 N 0.786
TCM_001836 Theobroma cacao TCM_001836 N 0.786
TCM_032128 Theobroma cacao TCM_032128 N 0.714
Thhalv10018229m.g Eutrema salsugineum Thhalv10018229m.g N 0.738
VIT_12s0142g00390 Vitis vinifera VIT_12s0142g00390 N 0.833