CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.005G140200
(
Gossypium raimondii
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Gorai.005G140200
T028341_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.005G140200.1
BED ZF
46
89
SEVWSHFTKFINSEGARKAKCNYCDKEFCCDMKKNGTGSLKYHS
Links
Other
BED ZF
family TFs
Other
Gossypium raimondii
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB010791
Anopheles albimanus
AALB010791
I
0.000
Aan_R009572
Calypte anna
Aan_R009572
I
0.000
AARA003299
Anopheles arabiensis
AARA003299
I
0.000
AATE015478
Anopheles atroparvus
AATE015478
I
0.000
ACOM026429
Anopheles coluzzii
ACOM026429
I
0.000
ACUA000806
Anopheles culicifacies
ACUA000806
I
0.000
ACYPI001692
Acyrthosiphon pisum
ACYPI001692
I
0.000
ADAC008672
Anopheles darlingi
ADAC008672
I
0.000
ADIR001886
Anopheles dirus
ADIR001886
I
0.000
AEPI000843
Anopheles epiroticus
AEPI000843
I
0.000
AFAF021556
Anopheles farauti
AFAF021556
I
0.000
Afo_R013462
Aptenodytes forsteri
Afo_R013462
I
0.000
AFUN015736
Anopheles funestus
AFUN015736
I
0.000
AGAP012211
Anopheles gambiae
AGAP012211
I
0.000
Alligator_sinensis_CCG005392.1
Alligator sinensis
Alligator_sinensis_CCG005392.1
I
0.000
Alligator_sinensis_CCG006068.1
Alligator sinensis
Alligator_sinensis_CCG006068.1
I
0.000
AMEM018998
Anopheles merus
AMEM018998
I
0.000
AMIN006955
Anopheles minimus
AMIN006955
I
0.000
AQUA002870
Anopheles quadriannulatus
AQUA002870
I
0.000
ASTEI02489
Anopheles stephensi
ASTEI02489
I
0.000
BGIBMGA006767
Bombyx mori
BGIBMGA006767
I
0.000
BGLB013636
Biomphalaria glabrata
BGLB013636
I
0.000
CapteG125155
Capitella teleta
CapteG125155
I
0.000
CGI_10007606
Crassostrea gigas
CGI_10007606
I
0.000
Cmyd_10001928
Chelonia mydas
Cmyd_10001928
I
0.000
Cmyd_10006875
Chelonia mydas
Cmyd_10006875
I
0.000
CPIJ002963
Culex quinquefasciatus
CPIJ002963
I
0.000
CpipJ_CPIJ002963
Culex pipiens
CpipJ_CPIJ002963
I
0.000
D917_00700
Trichinella nativa
D917_00700
I
0.000
D918_02615
Trichuris suis
D918_02615
I
0.000
DAPPUDRAFT_319648
Daphnia pulex
DAPPUDRAFT_319648
I
0.000
EcR
Drosophila melanogaster
FBgn0000546
D
0.000
ECR
Aedes aegypti
AAEL009600
I
0.000
EcR
Drosophila pseudoobscura
FBgn0243551
I
0.000
EFV58098
Trichinella spiralis
EFV58098
I
0.000
ENSACAG00000001535
Anolis carolinensis
ENSACAG00000001535
I
0.000
ENSAMEG00000007006
Ailuropoda melanoleuca
ENSAMEG00000007006
I
0.000
ENSAMEG00000013706
Ailuropoda melanoleuca
ENSAMEG00000013706
I
0.000
ENSAMEG00000015383
Ailuropoda melanoleuca
ENSAMEG00000015383
I
0.000
ENSAMXG00000008863
Astyanax mexicanus
ENSAMXG00000008863
I
0.000
ENSAMXG00000012991
Astyanax mexicanus
ENSAMXG00000012991
I
0.000
ENSAMXG00000019854
Astyanax mexicanus
ENSAMXG00000019854
I
0.000
ENSCHOG00000008514
Choloepus hoffmanni
ENSCHOG00000008514
I
0.000
ENSCPOG00000006025
Cavia porcellus
ENSCPOG00000006025
I
0.000
ENSCSAG00000006576
Chlorocebus sabaeus
ENSCSAG00000006576
I
0.000
ENSCSAVG00000001918
Ciona savignyi
ENSCSAVG00000001918
I
0.000
ENSCSAVG00000008466
Ciona savignyi
ENSCSAVG00000008466
I
0.000
ENSDORG00000001701
Dipodomys ordii
ENSDORG00000001701
I
0.000
ENSGALG00000026166
Gallus gallus
ENSGALG00000026166
I
0.000
ENSGMOG00000012720
Gadus morhua
ENSGMOG00000012720
I
0.000
ENSGMOG00000019451
Gadus morhua
ENSGMOG00000019451
I
0.000
ENSLACG00000010334
Latimeria chalumnae
ENSLACG00000010334
I
0.000
ENSLACG00000019104
Latimeria chalumnae
ENSLACG00000019104
I
0.000
ENSLOCG00000005194
Lepisosteus oculatus
ENSLOCG00000005194
I
0.000
ENSMEUG00000000113
Macropus eugenii
ENSMEUG00000000113
I
0.000
ENSMEUG00000001987
Macropus eugenii
ENSMEUG00000001987
I
0.000
ENSMEUG00000014791
Macropus eugenii
ENSMEUG00000014791
I
0.000
ENSMMUP00000008847
Macaca fascicularis
ENSMMUP00000008847
I
0.000
ENSMODG00000028774
Monodelphis domestica
ENSMODG00000028774
I
0.000
ENSMPUG00000000419
Mustela putorius furo
ENSMPUG00000000419
I
0.000
ENSMPUG00000014388
Mustela putorius furo
ENSMPUG00000014388
I
0.000
ENSNLEG00000005060
Nomascus leucogenys
ENSNLEG00000005060
I
0.000
ENSNLEG00000014287
Nomascus leucogenys
ENSNLEG00000014287
I
0.000
ENSNLEG00000017900
Nomascus leucogenys
ENSNLEG00000017900
I
0.000
ENSOARG00000009965
Ovis aries
ENSOARG00000009965
I
0.000
ENSOARG00000019372
Ovis aries
ENSOARG00000019372
I
0.000
ENSONIG00000009200
Oreochromis niloticus
ENSONIG00000009200
I
0.000
ENSONIG00000019378
Oreochromis niloticus
ENSONIG00000019378
I
0.000
ENSP00000229022-D1
Bos grunniens
ENSP00000229022-D1
I
0.000
ENSP00000336528
Macaca fascicularis
ENSP00000336528
I
0.000
ENSP00000336528-D1
Bos grunniens
ENSP00000336528-D1
I
0.000
ENSP00000356959-D1
Bos grunniens
ENSP00000356959-D1
I
0.000
ENSPANG00000011327
Papio anubis
ENSPANG00000011327
I
0.000
ENSPFOG00000001655
Poecilia formosa
ENSPFOG00000001655
I
0.000
ENSPFOG00000014233
Poecilia formosa
ENSPFOG00000014233
I
0.000
ENSPMAG00000000180
Petromyzon marinus
ENSPMAG00000000180
D
0.000
ENSPMAG00000003695
Petromyzon marinus
ENSPMAG00000003695
I
0.000
ENSPMAG00000008742
Petromyzon marinus
ENSPMAG00000008742
I
0.000
ENSPPYG00000004448
Pongo abelii
ENSPPYG00000004448
I
0.000
ENSPSIG00000004437
Pelodiscus sinensis
ENSPSIG00000004437
I
0.000
ENSPSIG00000018108
Pelodiscus sinensis
ENSPSIG00000018108
I
0.000
ENSSHAG00000004437
Sarcophilus harrisii
ENSSHAG00000004437
I
0.000
ENSSHAG00000016687
Sarcophilus harrisii
ENSSHAG00000016687
I
0.000
ENSSTOG00000003818
Ictidomys tridecemlineatus
ENSSTOG00000003818
I
0.000
ENSSTOG00000014988
Ictidomys tridecemlineatus
ENSSTOG00000014988
I
0.000
ENSSTOG00000026741
Ictidomys tridecemlineatus
ENSSTOG00000026741
I
0.000
ENSTSYG00000003990
Tarsius syrichta
ENSTSYG00000003990
I
0.000
ENSTSYG00000010757
Tarsius syrichta
ENSTSYG00000010757
I
0.000
ENSXMAG00000004608
Xiphophorus maculatus
ENSXMAG00000004608
I
0.000
ENSXMAG00000018707
Xiphophorus maculatus
ENSXMAG00000018707
I
0.000
GA24101
Drosophila pseudoobscura
FBgn0245500
I
0.000
GB48059
Apis mellifera
GB48059
I
0.000
GD10334
Drosophila simulans
FBgn0182106
I
0.000
GE19426
Drosophila yakuba
FBgn0236769
I
0.000
GF13818
Drosophila ananassae
FBgn0090845
I
0.000
Gfo_R005027
Geospiza fortis
Gfo_R005027
I
0.000
GG10830
Drosophila erecta
FBgn0103135
I
0.000
GH20948
Drosophila grimshawi
FBgn0128410
I
0.000
GI21285
Drosophila mojavensis
FBgn0144015
I
0.000
GJ20887
Drosophila virilis
FBgn0208023
I
0.000
GK21996
Drosophila willistoni
FBgn0223981
I
0.000
GL16258
Drosophila persimilis
FBgn0153862
I
0.000
GM16480
Drosophila sechellia
FBgn0171395
I
0.000
HMEL012265
Heliconius melpomene
HMEL012265
I
0.000
ISCW003147
Ixodes scapularis
ISCW003147
I
0.000
KGM_08219
Danaus plexippus
KGM_08219
I
0.000
L798_01568
Zootermopsis nevadensis
L798_01568
I
0.000
LCUP007589
Lucilia cuprina
LCUP007589
I
0.000
LDEC009466
Leptinotarsa decemlineata
LDEC009466
I
0.000
LotgiG170342
Lottia gigantea
LotgiG170342
I
0.000
MDOA013387
Musca domestica
MDOA013387
I
0.000
Myotis_brandtii_NR1I2_10031787
Myotis brandtii
Myotis_brandtii_NR1I2_10031787
I
0.000
Myotis_brandtii_VDR_10022134
Myotis brandtii
Myotis_brandtii_VDR_10022134
I
0.000
nr1i2
Tetraodon nigroviridis
ENSTNIG00000013932
I
0.000
NR1I2
Sus scrofa
ENSSSCG00000011890
I
0.000
NR1I2
Myotis lucifugus
ENSMLUG00000002877
I
0.000
Nr1i2
Rattus norvegicus
ENSRNOG00000002906
I
0.000
NR1I2
Bos taurus
ENSBTAG00000019557
I
0.000
nr1i2
Danio rerio
ENSDARG00000029766
I
0.000
Nr1i2
Dipodomys ordii
ENSDORG00000003966
I
0.000
Nr1i2
Mus musculus
ENSMUSG00000022809
D
0.000
NR1I2
Equus caballus
ENSECAG00000008728
I
0.000
NR1I2
Echinops telfairi
ENSETEG00000018117
I
0.000
NR1I2
Felis catus
ENSFCAG00000006092
I
0.000
NR1I2
Macaca mulatta
ENSMMUG00000001976
I
0.000
NR1I2
Gorilla gorilla
ENSGGOG00000007361
I
0.000
NR1I2
Cavia porcellus
ENSCPOG00000020161
I
0.000
NR1I2
Homo sapiens
ENSG00000144852
D
0.000
NR1I2
Pteropus vampyrus
ENSPVAG00000000884
I
0.000
NR1I2
Pan troglodytes
ENSPTRG00000015263
I
0.000
NR1I2
Otolemur garnettii
ENSOGAG00000006017
I
0.000
NR1I2
Procavia capensis
ENSPCAG00000009674
I
0.000
NR1I2
Ochotona princeps
ENSOPRG00000010448
I
0.000
NR1I2
Canis familiaris
ENSCAFG00000011094
I
0.000
NR1I2
Callithrix jacchus
ENSCJAG00000008854
I
0.000
NR1I2
Oryctolagus cuniculus
ENSOCUG00000006125
I
0.000
NR1I2
Loxodonta africana
ENSLAFG00000007829
I
0.000
nr1i2.L
Xenopus laevis
XB-GENE-17336519
I
0.000
nr1i2.S
Xenopus laevis
XB-GENE-865343
I
0.000
nr1i3
Xenopus tropicalis
XB-GENE-479859
I
0.000
NR1I3
Sorex araneus
ENSSARG00000002684
I
0.000
NR1I3
Pan troglodytes
ENSPTRG00000001582
I
0.000
NR1I3
Homo sapiens
ENSG00000143257
D
0.000
NR1I3
Procavia capensis
ENSPCAG00000013933
I
0.000
NR1I3
Loxodonta africana
ENSLAFG00000001180
I
0.000
NR1I3
Ochotona princeps
ENSOPRG00000003455
I
0.000
NR1I3
Otolemur garnettii
ENSOGAG00000013738
I
0.000
NR1I3
Oryctolagus cuniculus
ENSOCUG00000013537
I
0.000
Nr1i3
Mus musculus
ENSMUSG00000005677
D
0.000
NR1I3
Monodelphis domestica
ENSMODG00000005089
I
0.000
NR1I3
Gorilla gorilla
ENSGGOG00000005724
I
0.000
NR1I3
Pteropus vampyrus
ENSPVAG00000005540
I
0.000
NR1I3
Cavia porcellus
ENSCPOG00000015331
I
0.000
Nr1i3
Rattus norvegicus
ENSRNOG00000003260
I
0.000
NR1I3
Callithrix jacchus
ENSCJAG00000004783
I
0.000
NR1I3
Dasypus novemcinctus
ENSDNOG00000045179
I
0.000
NR1I3
Equus caballus
ENSECAG00000020930
I
0.000
NR1I3
Erinaceus europaeus
ENSEEUG00000004981
I
0.000
NR1I3
Canis familiaris
ENSCAFG00000012921
I
0.000
NR1I3
Sus scrofa
ENSSSCG00000006353
I
0.000
NR1I3
Bos taurus
ENSBTAG00000009215
I
0.000
NR1I3
Felis catus
ENSFCAG00000000497
I
0.000
NV11088
Nasonia vitripennis
NV11088
I
0.000
Ogr03312
Ophisaurus gracilis
Ogr03312
I
0.000
PHUM467460
Pediculus humanus
PHUM467460
I
0.000
PPAI003337
Phlebotomus papatasi
PPAI003337
I
0.000
Pvit_07440
Pogona vitticeps
Pvit_07440
I
0.000
Pvit_09404
Pogona vitticeps
Pvit_09404
I
0.000
Pvit_09406
Pogona vitticeps
Pvit_09406
I
0.000
Q9DFH3_CHICK
Gallus gallus
Q9DFH3_CHICK
I
0.000
RPRC014174
Rhodnius prolixus
RPRC014174
I
0.000
SMAR011767
Strigamia maritima
SMAR011767
I
0.000
SNAPOd2T00001873001
Oikopleura dioica
SNAPOd2T00001873001
I
0.000
TC012112
Tribolium castaneum
TC012112
I
0.000
tetur01g15140
Tetranychus urticae
tetur01g15140
I
0.000
TMUE_s0008014200
Trichuris muris
TMUE_s0008014200
I
0.000
TriadG21656
Trichoplax adhaerens
TriadG21656
I
0.000
VDR
Meleagris gallopavo
ENSMGAG00000004846
I
0.000
VDR
Pteropus vampyrus
ENSPVAG00000011085
I
0.000
Vdr
Rattus norvegicus
ENSRNOG00000054420
I
0.000
VDR
Erinaceus europaeus
ENSEEUG00000011116
I
0.000
VDR
Sus scrofa
ENSSSCG00000020864
I
0.000
VDR
Tupaia belangeri
ENSTBEG00000005717
I
0.000
VDR
Equus caballus
ENSECAG00000015822
I
0.000
VDR
Taeniopygia guttata
ENSTGUG00000017093
I
0.000
VDR
Dasypus novemcinctus
ENSDNOG00000039161
I
0.000
VDR
Tursiops truncatus
ENSTTRG00000012578
I
0.000
VDR
Callithrix jacchus
ENSCJAG00000015018
I
0.000
VDR
Canis familiaris
ENSCAFG00000009103
I
0.000
VDR
Bos taurus
ENSBTAG00000016414
I
0.000
VDR
Anolis carolinensis
ENSACAG00000013485
I
0.000
VDR
Homo sapiens
ENSG00000111424
D
0.000
VDR
Felis catus
ENSFCAG00000024594
I
0.000
VDR
Macaca mulatta
ENSMMUG00000006727
I
0.000
VDR
Oryctolagus cuniculus
ENSOCUG00000027507
I
0.000
VDR
Otolemur garnettii
ENSOGAG00000005480
I
0.000
VDR
Microcebus murinus
ENSMICG00000009017
I
0.000
VDR
Gorilla gorilla
ENSGGOG00000016473
I
0.000
VDR
Myotis lucifugus
ENSMLUG00000000912
I
0.000
vdr
Oryzias latipes
ENSORLG00000016402
I
0.000
VDR
Loxodonta africana
ENSLAFG00000006418
I
0.000
vdr
Xenopus tropicalis
XB-GENE-486505
I
0.000
Vdr
Mus musculus
ENSMUSG00000022479
D
0.000
vdr-a
Ciona intestinalis
ENSCING00000020740
I
0.000
vdr.S
Xenopus laevis
XB-GENE-864847
I
0.000
vdra
Tetraodon nigroviridis
ENSTNIG00000005559
I
0.000
vdra
Takifugu rubripes
ENSTRUG00000011907
I
0.000
vdra
Gasterosteus aculeatus
ENSGACG00000004763
I
0.000
vdralpha
Oryzias latipes
ENSORLG00000001063
I
0.000
vdrb
Tetraodon nigroviridis
ENSTNIG00000007031
I
0.000
vdrb
Gasterosteus aculeatus
ENSGACG00000007975
I
0.000
vdrb
Takifugu rubripes
ENSTRUG00000011576
I
0.000
vdrb
Danio rerio
ENSDARG00000070721
I
0.000