Gorai.005G140200 (Gossypium raimondii)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Gorai.005G140200 T028341_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G140200.1 BED ZF 46 89

Links

Other BED ZF family TFs
Other Gossypium raimondii TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AALB010791 Anopheles albimanus AALB010791 I 0.000
Aan_R009572 Calypte anna Aan_R009572 I 0.000
AARA003299 Anopheles arabiensis AARA003299 I 0.000
AATE015478 Anopheles atroparvus AATE015478 I 0.000
ACOM026429 Anopheles coluzzii ACOM026429 I 0.000
ACUA000806 Anopheles culicifacies ACUA000806 I 0.000
ACYPI001692 Acyrthosiphon pisum ACYPI001692 I 0.000
ADAC008672 Anopheles darlingi ADAC008672 I 0.000
ADIR001886 Anopheles dirus ADIR001886 I 0.000
AEPI000843 Anopheles epiroticus AEPI000843 I 0.000
AFAF021556 Anopheles farauti AFAF021556 I 0.000
Afo_R013462 Aptenodytes forsteri Afo_R013462 I 0.000
AFUN015736 Anopheles funestus AFUN015736 I 0.000
AGAP012211 Anopheles gambiae AGAP012211 I 0.000
Alligator_sinensis_CCG005392.1 Alligator sinensis Alligator_sinensis_CCG005392.1 I 0.000
Alligator_sinensis_CCG006068.1 Alligator sinensis Alligator_sinensis_CCG006068.1 I 0.000
AMEM018998 Anopheles merus AMEM018998 I 0.000
AMIN006955 Anopheles minimus AMIN006955 I 0.000
AQUA002870 Anopheles quadriannulatus AQUA002870 I 0.000
ASTEI02489 Anopheles stephensi ASTEI02489 I 0.000
BGIBMGA006767 Bombyx mori BGIBMGA006767 I 0.000
BGLB013636 Biomphalaria glabrata BGLB013636 I 0.000
CapteG125155 Capitella teleta CapteG125155 I 0.000
CGI_10007606 Crassostrea gigas CGI_10007606 I 0.000
Cmyd_10001928 Chelonia mydas Cmyd_10001928 I 0.000
Cmyd_10006875 Chelonia mydas Cmyd_10006875 I 0.000
CPIJ002963 Culex quinquefasciatus CPIJ002963 I 0.000
CpipJ_CPIJ002963 Culex pipiens CpipJ_CPIJ002963 I 0.000
D917_00700 Trichinella nativa D917_00700 I 0.000
D918_02615 Trichuris suis D918_02615 I 0.000
DAPPUDRAFT_319648 Daphnia pulex DAPPUDRAFT_319648 I 0.000
EcR Drosophila melanogaster FBgn0000546 D 0.000
ECR Aedes aegypti AAEL009600 I 0.000
EcR Drosophila pseudoobscura FBgn0243551 I 0.000
EFV58098 Trichinella spiralis EFV58098 I 0.000
ENSACAG00000001535 Anolis carolinensis ENSACAG00000001535 I 0.000
ENSAMEG00000007006 Ailuropoda melanoleuca ENSAMEG00000007006 I 0.000
ENSAMEG00000013706 Ailuropoda melanoleuca ENSAMEG00000013706 I 0.000
ENSAMEG00000015383 Ailuropoda melanoleuca ENSAMEG00000015383 I 0.000
ENSAMXG00000008863 Astyanax mexicanus ENSAMXG00000008863 I 0.000
ENSAMXG00000012991 Astyanax mexicanus ENSAMXG00000012991 I 0.000
ENSAMXG00000019854 Astyanax mexicanus ENSAMXG00000019854 I 0.000
ENSCHOG00000008514 Choloepus hoffmanni ENSCHOG00000008514 I 0.000
ENSCPOG00000006025 Cavia porcellus ENSCPOG00000006025 I 0.000
ENSCSAG00000006576 Chlorocebus sabaeus ENSCSAG00000006576 I 0.000
ENSCSAVG00000001918 Ciona savignyi ENSCSAVG00000001918 I 0.000
ENSCSAVG00000008466 Ciona savignyi ENSCSAVG00000008466 I 0.000
ENSDORG00000001701 Dipodomys ordii ENSDORG00000001701 I 0.000
ENSGALG00000026166 Gallus gallus ENSGALG00000026166 I 0.000
ENSGMOG00000012720 Gadus morhua ENSGMOG00000012720 I 0.000
ENSGMOG00000019451 Gadus morhua ENSGMOG00000019451 I 0.000
ENSLACG00000010334 Latimeria chalumnae ENSLACG00000010334 I 0.000
ENSLACG00000019104 Latimeria chalumnae ENSLACG00000019104 I 0.000
ENSLOCG00000005194 Lepisosteus oculatus ENSLOCG00000005194 I 0.000
ENSMEUG00000000113 Macropus eugenii ENSMEUG00000000113 I 0.000
ENSMEUG00000001987 Macropus eugenii ENSMEUG00000001987 I 0.000
ENSMEUG00000014791 Macropus eugenii ENSMEUG00000014791 I 0.000
ENSMMUP00000008847 Macaca fascicularis ENSMMUP00000008847 I 0.000
ENSMODG00000028774 Monodelphis domestica ENSMODG00000028774 I 0.000
ENSMPUG00000000419 Mustela putorius furo ENSMPUG00000000419 I 0.000
ENSMPUG00000014388 Mustela putorius furo ENSMPUG00000014388 I 0.000
ENSNLEG00000005060 Nomascus leucogenys ENSNLEG00000005060 I 0.000
ENSNLEG00000014287 Nomascus leucogenys ENSNLEG00000014287 I 0.000
ENSNLEG00000017900 Nomascus leucogenys ENSNLEG00000017900 I 0.000
ENSOARG00000009965 Ovis aries ENSOARG00000009965 I 0.000
ENSOARG00000019372 Ovis aries ENSOARG00000019372 I 0.000
ENSONIG00000009200 Oreochromis niloticus ENSONIG00000009200 I 0.000
ENSONIG00000019378 Oreochromis niloticus ENSONIG00000019378 I 0.000
ENSP00000229022-D1 Bos grunniens ENSP00000229022-D1 I 0.000
ENSP00000336528 Macaca fascicularis ENSP00000336528 I 0.000
ENSP00000336528-D1 Bos grunniens ENSP00000336528-D1 I 0.000
ENSP00000356959-D1 Bos grunniens ENSP00000356959-D1 I 0.000
ENSPANG00000011327 Papio anubis ENSPANG00000011327 I 0.000
ENSPFOG00000001655 Poecilia formosa ENSPFOG00000001655 I 0.000
ENSPFOG00000014233 Poecilia formosa ENSPFOG00000014233 I 0.000
ENSPMAG00000000180 Petromyzon marinus ENSPMAG00000000180 D 0.000
ENSPMAG00000003695 Petromyzon marinus ENSPMAG00000003695 I 0.000
ENSPMAG00000008742 Petromyzon marinus ENSPMAG00000008742 I 0.000
ENSPPYG00000004448 Pongo abelii ENSPPYG00000004448 I 0.000
ENSPSIG00000004437 Pelodiscus sinensis ENSPSIG00000004437 I 0.000
ENSPSIG00000018108 Pelodiscus sinensis ENSPSIG00000018108 I 0.000
ENSSHAG00000004437 Sarcophilus harrisii ENSSHAG00000004437 I 0.000
ENSSHAG00000016687 Sarcophilus harrisii ENSSHAG00000016687 I 0.000
ENSSTOG00000003818 Ictidomys tridecemlineatus ENSSTOG00000003818 I 0.000
ENSSTOG00000014988 Ictidomys tridecemlineatus ENSSTOG00000014988 I 0.000
ENSSTOG00000026741 Ictidomys tridecemlineatus ENSSTOG00000026741 I 0.000
ENSTSYG00000003990 Tarsius syrichta ENSTSYG00000003990 I 0.000
ENSTSYG00000010757 Tarsius syrichta ENSTSYG00000010757 I 0.000
ENSXMAG00000004608 Xiphophorus maculatus ENSXMAG00000004608 I 0.000
ENSXMAG00000018707 Xiphophorus maculatus ENSXMAG00000018707 I 0.000
GA24101 Drosophila pseudoobscura FBgn0245500 I 0.000
GB48059 Apis mellifera GB48059 I 0.000
GD10334 Drosophila simulans FBgn0182106 I 0.000
GE19426 Drosophila yakuba FBgn0236769 I 0.000
GF13818 Drosophila ananassae FBgn0090845 I 0.000
Gfo_R005027 Geospiza fortis Gfo_R005027 I 0.000
GG10830 Drosophila erecta FBgn0103135 I 0.000
GH20948 Drosophila grimshawi FBgn0128410 I 0.000
GI21285 Drosophila mojavensis FBgn0144015 I 0.000
GJ20887 Drosophila virilis FBgn0208023 I 0.000
GK21996 Drosophila willistoni FBgn0223981 I 0.000
GL16258 Drosophila persimilis FBgn0153862 I 0.000
GM16480 Drosophila sechellia FBgn0171395 I 0.000
HMEL012265 Heliconius melpomene HMEL012265 I 0.000
ISCW003147 Ixodes scapularis ISCW003147 I 0.000
KGM_08219 Danaus plexippus KGM_08219 I 0.000
L798_01568 Zootermopsis nevadensis L798_01568 I 0.000
LCUP007589 Lucilia cuprina LCUP007589 I 0.000
LDEC009466 Leptinotarsa decemlineata LDEC009466 I 0.000
LotgiG170342 Lottia gigantea LotgiG170342 I 0.000
MDOA013387 Musca domestica MDOA013387 I 0.000
Myotis_brandtii_NR1I2_10031787 Myotis brandtii Myotis_brandtii_NR1I2_10031787 I 0.000
Myotis_brandtii_VDR_10022134 Myotis brandtii Myotis_brandtii_VDR_10022134 I 0.000
nr1i2 Tetraodon nigroviridis ENSTNIG00000013932 I 0.000
NR1I2 Sus scrofa ENSSSCG00000011890 I 0.000
NR1I2 Myotis lucifugus ENSMLUG00000002877 I 0.000
Nr1i2 Rattus norvegicus ENSRNOG00000002906 I 0.000
NR1I2 Bos taurus ENSBTAG00000019557 I 0.000
nr1i2 Danio rerio ENSDARG00000029766 I 0.000
Nr1i2 Dipodomys ordii ENSDORG00000003966 I 0.000
Nr1i2 Mus musculus ENSMUSG00000022809 D 0.000
NR1I2 Equus caballus ENSECAG00000008728 I 0.000
NR1I2 Echinops telfairi ENSETEG00000018117 I 0.000
NR1I2 Felis catus ENSFCAG00000006092 I 0.000
NR1I2 Macaca mulatta ENSMMUG00000001976 I 0.000
NR1I2 Gorilla gorilla ENSGGOG00000007361 I 0.000
NR1I2 Cavia porcellus ENSCPOG00000020161 I 0.000
NR1I2 Homo sapiens ENSG00000144852 D 0.000
NR1I2 Pteropus vampyrus ENSPVAG00000000884 I 0.000
NR1I2 Pan troglodytes ENSPTRG00000015263 I 0.000
NR1I2 Otolemur garnettii ENSOGAG00000006017 I 0.000
NR1I2 Procavia capensis ENSPCAG00000009674 I 0.000
NR1I2 Ochotona princeps ENSOPRG00000010448 I 0.000
NR1I2 Canis familiaris ENSCAFG00000011094 I 0.000
NR1I2 Callithrix jacchus ENSCJAG00000008854 I 0.000
NR1I2 Oryctolagus cuniculus ENSOCUG00000006125 I 0.000
NR1I2 Loxodonta africana ENSLAFG00000007829 I 0.000
nr1i2.L Xenopus laevis XB-GENE-17336519 I 0.000
nr1i2.S Xenopus laevis XB-GENE-865343 I 0.000
nr1i3 Xenopus tropicalis XB-GENE-479859 I 0.000
NR1I3 Sorex araneus ENSSARG00000002684 I 0.000
NR1I3 Pan troglodytes ENSPTRG00000001582 I 0.000
NR1I3 Homo sapiens ENSG00000143257 D 0.000
NR1I3 Procavia capensis ENSPCAG00000013933 I 0.000
NR1I3 Loxodonta africana ENSLAFG00000001180 I 0.000
NR1I3 Ochotona princeps ENSOPRG00000003455 I 0.000
NR1I3 Otolemur garnettii ENSOGAG00000013738 I 0.000
NR1I3 Oryctolagus cuniculus ENSOCUG00000013537 I 0.000
Nr1i3 Mus musculus ENSMUSG00000005677 D 0.000
NR1I3 Monodelphis domestica ENSMODG00000005089 I 0.000
NR1I3 Gorilla gorilla ENSGGOG00000005724 I 0.000
NR1I3 Pteropus vampyrus ENSPVAG00000005540 I 0.000
NR1I3 Cavia porcellus ENSCPOG00000015331 I 0.000
Nr1i3 Rattus norvegicus ENSRNOG00000003260 I 0.000
NR1I3 Callithrix jacchus ENSCJAG00000004783 I 0.000
NR1I3 Dasypus novemcinctus ENSDNOG00000045179 I 0.000
NR1I3 Equus caballus ENSECAG00000020930 I 0.000
NR1I3 Erinaceus europaeus ENSEEUG00000004981 I 0.000
NR1I3 Canis familiaris ENSCAFG00000012921 I 0.000
NR1I3 Sus scrofa ENSSSCG00000006353 I 0.000
NR1I3 Bos taurus ENSBTAG00000009215 I 0.000
NR1I3 Felis catus ENSFCAG00000000497 I 0.000
NV11088 Nasonia vitripennis NV11088 I 0.000
Ogr03312 Ophisaurus gracilis Ogr03312 I 0.000
PHUM467460 Pediculus humanus PHUM467460 I 0.000
PPAI003337 Phlebotomus papatasi PPAI003337 I 0.000
Pvit_07440 Pogona vitticeps Pvit_07440 I 0.000
Pvit_09404 Pogona vitticeps Pvit_09404 I 0.000
Pvit_09406 Pogona vitticeps Pvit_09406 I 0.000
Q9DFH3_CHICK Gallus gallus Q9DFH3_CHICK I 0.000
RPRC014174 Rhodnius prolixus RPRC014174 I 0.000
SMAR011767 Strigamia maritima SMAR011767 I 0.000
SNAPOd2T00001873001 Oikopleura dioica SNAPOd2T00001873001 I 0.000
TC012112 Tribolium castaneum TC012112 I 0.000
tetur01g15140 Tetranychus urticae tetur01g15140 I 0.000
TMUE_s0008014200 Trichuris muris TMUE_s0008014200 I 0.000
TriadG21656 Trichoplax adhaerens TriadG21656 I 0.000
VDR Meleagris gallopavo ENSMGAG00000004846 I 0.000
VDR Pteropus vampyrus ENSPVAG00000011085 I 0.000
Vdr Rattus norvegicus ENSRNOG00000054420 I 0.000
VDR Erinaceus europaeus ENSEEUG00000011116 I 0.000
VDR Sus scrofa ENSSSCG00000020864 I 0.000
VDR Tupaia belangeri ENSTBEG00000005717 I 0.000
VDR Equus caballus ENSECAG00000015822 I 0.000
VDR Taeniopygia guttata ENSTGUG00000017093 I 0.000
VDR Dasypus novemcinctus ENSDNOG00000039161 I 0.000
VDR Tursiops truncatus ENSTTRG00000012578 I 0.000
VDR Callithrix jacchus ENSCJAG00000015018 I 0.000
VDR Canis familiaris ENSCAFG00000009103 I 0.000
VDR Bos taurus ENSBTAG00000016414 I 0.000
VDR Anolis carolinensis ENSACAG00000013485 I 0.000
VDR Homo sapiens ENSG00000111424 D 0.000
VDR Felis catus ENSFCAG00000024594 I 0.000
VDR Macaca mulatta ENSMMUG00000006727 I 0.000
VDR Oryctolagus cuniculus ENSOCUG00000027507 I 0.000
VDR Otolemur garnettii ENSOGAG00000005480 I 0.000
VDR Microcebus murinus ENSMICG00000009017 I 0.000
VDR Gorilla gorilla ENSGGOG00000016473 I 0.000
VDR Myotis lucifugus ENSMLUG00000000912 I 0.000
vdr Oryzias latipes ENSORLG00000016402 I 0.000
VDR Loxodonta africana ENSLAFG00000006418 I 0.000
vdr Xenopus tropicalis XB-GENE-486505 I 0.000
Vdr Mus musculus ENSMUSG00000022479 D 0.000
vdr-a Ciona intestinalis ENSCING00000020740 I 0.000
vdr.S Xenopus laevis XB-GENE-864847 I 0.000
vdra Tetraodon nigroviridis ENSTNIG00000005559 I 0.000
vdra Takifugu rubripes ENSTRUG00000011907 I 0.000
vdra Gasterosteus aculeatus ENSGACG00000004763 I 0.000
vdralpha Oryzias latipes ENSORLG00000001063 I 0.000
vdrb Tetraodon nigroviridis ENSTNIG00000007031 I 0.000
vdrb Gasterosteus aculeatus ENSGACG00000007975 I 0.000
vdrb Takifugu rubripes ENSTRUG00000011576 I 0.000
vdrb Danio rerio ENSDARG00000070721 I 0.000