Gorai.010G061600 (Gossypium raimondii)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Gorai.010G061600 T028358_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.010G061600.1 BED ZF 38 89

Links

Other BED ZF family TFs
Other Gossypium raimondii TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.010G061500 Gossypium raimondii Gorai.010G061500 N 1.000
Gorai.004G107300 Gossypium raimondii Gorai.004G107300 N 0.909
TCM_038144 Theobroma cacao TCM_038144 N 0.909
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N 0.864
VIT_11s0016g05750 Vitis vinifera VIT_11s0016g05750 N 0.864
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N 0.864
MDP0000394762 Malus domestica MDP0000394762 N 0.864
mgf025287m Mimulus guttatus mgf025287m N 0.864
PK27100.1 Cannabis sativa PK27100.1 N 0.864
Cucsa.036140 Cucumis sativus Cucsa.036140 N 0.864
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.864
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.864
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N 0.841
POPTR_0018s12690 Populus trichocarpa POPTR_0018s12690 N 0.841
POPTR_0004s12760 Populus trichocarpa POPTR_0004s12760 N 0.841
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N 0.841
SapurV1A.0034s0250 Salix purpurea SapurV1A.0034s0250 N 0.841
GLYMA13G22881 Glycine max GLYMA13G22881 N 0.841
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N 0.841
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N 0.841
GLYMA13G22855 Glycine max GLYMA13G22855 N 0.841
MDP0000197332 Malus domestica MDP0000197332 N 0.818
fgenesh1_pm.C_scaffold_5000603 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5000603 N 0.818
GLYMA17G11981 Glycine max GLYMA17G11981 N 0.818
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N 0.818
PGSC0003DMG400023690 Solanum tuberosum PGSC0003DMG400023690 N 0.818
Carubv10008021m.g Capsella rubella Carubv10008021m.g N 0.818
Cagra.13611s0003 Capsella grandiflora Cagra.13611s0003 N 0.818
POPTR_0004s12810 Populus trichocarpa POPTR_0004s12810 N 0.818
Thhalv10002435m.g Eutrema salsugineum Thhalv10002435m.g N 0.818
POPTR_0018s12680 Populus trichocarpa POPTR_0018s12680 N 0.795
Bo4g137780 Brassica oleracea Bo4g137780 N 0.795
SapurV1A.0197s0170 Salix purpurea SapurV1A.0197s0170 N 0.773
GSMUA_Achr8G29120_001 Musa acuminata GSMUA_Achr8G29120_001 N 0.750
SapurV1A.0199s0250 Salix purpurea SapurV1A.0199s0250 N 0.750
GSMUA_Achr3G16690_001 Musa acuminata GSMUA_Achr3G16690_001 N 0.750
cassava11655.m1 Manihot esculenta cassava11655.m1 N 0.750
GLYMA07G03280 Glycine max GLYMA07G03280 N 0.750
SapurV1A.0344s0280 Salix purpurea SapurV1A.0344s0280 N 0.750
HAT Arabidopsis thaliana AT3G42170 N 0.750
Lus10032337.g Linum usitatissimum Lus10032337.g N 0.750
POPTR_0003s02610 Populus trichocarpa POPTR_0003s02610 N 0.750
Bostr.0556s0643 Boechera stricta Bostr.0556s0643 N 0.750
POPTR_0001s20900 Populus trichocarpa POPTR_0001s20900 N 0.750
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N 0.727
gene15718-v1.0-hybrid Fragaria vesca gene15718-v1.0-hybrid N 0.727
Pavir.J05554 Panicum virgatum Pavir.J05554 N 0.727
Traes_4BS_D5227ED8B Triticum aestivum Traes_4BS_D5227ED8B N 0.727
Pm013703 Prunus mume Pm013703 N 0.727
Si034159m.g Setaria italica Si034159m.g N 0.727
Solyc03g116840.1 Solanum lycopersicum Solyc03g116840.1 N 0.727
PRUPE_ppa002495mg Prunus persica PRUPE_ppa002495mg N 0.727
PGSC0003DMG400019816 Solanum tuberosum PGSC0003DMG400019816 N 0.727
GSMUA_Achr3G02770_001 Musa acuminata GSMUA_Achr3G02770_001 N 0.727
MLOC_75540 Hordeum vulgare MLOC_75540 N 0.727
OB08G27850 Oryza brachyantha OB08G27850 N 0.727
Traes_4AL_54F25AA7C Triticum aestivum Traes_4AL_54F25AA7C N 0.727
Sb02g043380 Sorghum bicolor Sb02g043380 N 0.727
VIT_09s0002g07340 Vitis vinifera VIT_09s0002g07340 N 0.727
Traes_4DS_990D31BB1 Triticum aestivum Traes_4DS_990D31BB1 N 0.727
OB08G27840 Oryza brachyantha OB08G27840 N 0.705
Pavir.J31170 Panicum virgatum Pavir.J31170 N 0.705
Carubv10019720m.g Capsella rubella Carubv10019720m.g N 0.705
BRADI3G40810 Brachypodium distachyon BRADI3G40810 N 0.705
MLOC_66012 Hordeum vulgare MLOC_66012 N 0.705
Cagra.1725s0137 Capsella grandiflora Cagra.1725s0137 N 0.705
Traes_4DS_9C5CECE46 Triticum aestivum Traes_4DS_9C5CECE46 N 0.705
GSMUA_Achr10G16260_001 Musa acuminata GSMUA_Achr10G16260_001 N 0.705
Pavir.Eb00997 Panicum virgatum Pavir.Eb00997 N 0.705
Si000431m.g Setaria italica Si000431m.g N 0.705
Traes_4BS_5B1737D7C Triticum aestivum Traes_4BS_5B1737D7C N 0.705
Traes_4AL_A494372EB Triticum aestivum Traes_4AL_A494372EB N 0.705
Sb01g009090 Sorghum bicolor Sb01g009090 N 0.705
Ciclev10025036m.g Citrus clementina Ciclev10025036m.g N 0.705
Pavir.Eb00995 Panicum virgatum Pavir.Eb00995 N 0.705
orange1.1g005485m.g Citrus sinensis orange1.1g005485m.g N 0.705
gene31106-v1.0-hybrid Fragaria vesca gene31106-v1.0-hybrid N 0.705