Gorai.012G042700 (Gossypium raimondii)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Gorai.012G042700 T028365_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.012G042700.1 BED ZF 16 66

Links

Other BED ZF family TFs
Other Gossypium raimondii TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_001836 Theobroma cacao TCM_001836 N 1.000
cassava35563.valid.m1 Manihot esculenta cassava35563.valid.m1 N 0.977
Solyc10g007810.2 Solanum lycopersicum Solyc10g007810.2 N 0.953
PGSC0003DMG400021240 Solanum tuberosum PGSC0003DMG400021240 N 0.953
VIT_12s0142g00390 Vitis vinifera VIT_12s0142g00390 N 0.953
cassava21091.m1 Manihot esculenta cassava21091.m1 N 0.930
Cucsa.185330 Cucumis sativus Cucsa.185330 N 0.930
Eucgr.K01194 Eucalyptus grandis Eucgr.K01194 N 0.909
mgf000829m Mimulus guttatus mgf000829m N 0.884
GLYMA08G42321 Glycine max GLYMA08G42321 N 0.884
GLYMA18G12556 Glycine max GLYMA18G12556 N 0.884
PK13949.1 Cannabis sativa PK13949.1 N 0.860
Carubv10022346m.g Capsella rubella Carubv10022346m.g N 0.814
Cagra.10840s0006 Capsella grandiflora Cagra.10840s0006 N 0.814
Bostr.10273s0360 Boechera stricta Bostr.10273s0360 N 0.814
Aquca_039_00001 Aquilegia coerulea Aquca_039_00001 N 0.791
gene24495-v1.0-hybrid Fragaria vesca gene24495-v1.0-hybrid N 0.786
Pm014562 Prunus mume Pm014562 N 0.786
PRUPE_ppa002590mg Prunus persica PRUPE_ppa002590mg N 0.786
Thhalv10018229m.g Eutrema salsugineum Thhalv10018229m.g N 0.773
Aquca_102_00001 Aquilegia coerulea Aquca_102_00001 N 0.744
Bo6g110620 Brassica oleracea Bo6g110620 N 0.744