MDP0000314867 (Malus domestica)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 MDP0000314867 T028404_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000314867 BED ZF 8 55
MDP0000314867 BED ZF 131 180

Links

Other BED ZF family TFs
Other Malus domestica TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000133479 Malus domestica MDP0000133479 N 1.000
gene22812-v1.0-hybrid Fragaria vesca gene22812-v1.0-hybrid N 0.976
Pm008491 Prunus mume Pm008491 N 0.964
Cucsa.252180 Cucumis sativus Cucsa.252180 N 0.964
PRUPE_ppa001126mg Prunus persica PRUPE_ppa001126mg N 0.964
PK21594.1 Cannabis sativa PK21594.1 N 0.917
Cagra.4396s0051 Capsella grandiflora Cagra.4396s0051 N 0.905
Bostr.19424s0919 Boechera stricta Bostr.19424s0919 N 0.905
VIT_05s0020g00790 Vitis vinifera VIT_05s0020g00790 N 0.905
Carubv10013083m.g Capsella rubella Carubv10013083m.g N 0.905
Thhalv10020031m.g Eutrema salsugineum Thhalv10020031m.g N 0.905
GSMUA_Achr3G12820_001 Musa acuminata GSMUA_Achr3G12820_001 N 0.893
GLYMA15G21351 Glycine max GLYMA15G21351 N 0.893
GLYMA09G09291 Glycine max GLYMA09G09291 N 0.893
AT3G17450 Arabidopsis thaliana AT3G17450 N 0.881
29889.m003394 Ricinus communis 29889.m003394 N 0.881
LjT35D18.120.nc Lotus japonicus LjT35D18.120.nc N 0.881
TCM_021492 Theobroma cacao TCM_021492 N 0.869
Bo00763s120 Brassica oleracea Bo00763s120 N 0.857
orange1.1g044693m.g Citrus sinensis orange1.1g044693m.g N 0.845
POPTR_0014s10940 Populus trichocarpa POPTR_0014s10940 N 0.845
TCM_004927 Theobroma cacao TCM_004927 N 0.845
SapurV1A.0294s0300 Salix purpurea SapurV1A.0294s0300 N 0.845
Ciclev10024195m.g Citrus clementina Ciclev10024195m.g N 0.845
cassava36089.valid.m1 Manihot esculenta cassava36089.valid.m1 N 0.845
evm.TU.supercontig_519.2 Carica papaya evm.TU.supercontig_519.2 N 0.845
Aquca_029_00055 Aquilegia coerulea Aquca_029_00055 N 0.833
Eucgr.B02527 Eucalyptus grandis Eucgr.B02527 N 0.833
POPTR_0002s18950 Populus trichocarpa POPTR_0002s18950 N 0.821
Gorai.008G135400 Gossypium raimondii Gorai.008G135400 N 0.821
SapurV1A.0014s0420 Salix purpurea SapurV1A.0014s0420 N 0.821