Pavir.Ba02216 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.Ba02216 T028437_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba02216.1.p BED ZF 70 114
Pavir.Ba02216.2.p BED ZF 38 82

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI09G09250 Oryza rufipogon ORUFI09G09250 N 0.738
OS09G0382120 Oryza sativa OS09G0382120 N 0.738
OS09G0381800 Oryza sativa OS09G0381800 N 0.714
ORGLA09G0063700 Oryza glaberrima ORGLA09G0063700 N 0.714
ONIVA09G07590 Oryza nivara ONIVA09G07590 N 0.714
OPUNC09G07350 Oryza punctata OPUNC09G07350 N 0.714
BGIOSGA029844 Oryza indica BGIOSGA029844 N 0.707