Pavir.Ga00028 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.Ga00028 T028496_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga00028.1.p BED ZF 140 192

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Gb00931 Panicum virgatum Pavir.Gb00931 N 0.955
Pavir.J40131 Panicum virgatum Pavir.J40131 N 0.955
Pavir.Fa02339 Panicum virgatum Pavir.Fa02339 N 0.886
ORUFI04G07440 Oryza rufipogon ORUFI04G07440 N 0.841
ORUFI04G27440 Oryza rufipogon ORUFI04G27440 N 0.762
OLONG_018092 Oryza longistaminata OLONG_018092 N 0.762
OBART04G26300 Oryza barthii OBART04G26300 N 0.762
BGIOSGA017162 Oryza indica BGIOSGA017162 N 0.762
OMERI04G21350 Oryza meridionalis OMERI04G21350 N 0.738
ORGLA04G0227900 Oryza glaberrima ORGLA04G0227900 N 0.727
OBART04G26290 Oryza barthii OBART04G26290 N 0.727