SapurV1A.0014s0420 (Salix purpurea)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 SapurV1A.0014s0420 T028648_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0014s0420.1.p BED ZF 11 57
SapurV1A.0014s0420.1.p BED ZF 130 177

Links

Other BED ZF family TFs
Other Salix purpurea TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0002s18950 Populus trichocarpa POPTR_0002s18950 N 0.976
POPTR_0014s10940 Populus trichocarpa POPTR_0014s10940 N 0.976
Ciclev10024195m.g Citrus clementina Ciclev10024195m.g N 0.976
orange1.1g044693m.g Citrus sinensis orange1.1g044693m.g N 0.976
SapurV1A.0294s0300 Salix purpurea SapurV1A.0294s0300 N 0.976
TCM_004927 Theobroma cacao TCM_004927 N 0.964
cassava36089.valid.m1 Manihot esculenta cassava36089.valid.m1 N 0.952
Eucgr.B02527 Eucalyptus grandis Eucgr.B02527 N 0.929
evm.TU.supercontig_519.2 Carica papaya evm.TU.supercontig_519.2 N 0.928
Gorai.008G135400 Gossypium raimondii Gorai.008G135400 N 0.928
VIT_05s0020g00790 Vitis vinifera VIT_05s0020g00790 N 0.880
Cagra.4396s0051 Capsella grandiflora Cagra.4396s0051 N 0.855
Thhalv10020031m.g Eutrema salsugineum Thhalv10020031m.g N 0.855
Carubv10013083m.g Capsella rubella Carubv10013083m.g N 0.855
Bostr.19424s0919 Boechera stricta Bostr.19424s0919 N 0.855
Aquca_029_00055 Aquilegia coerulea Aquca_029_00055 N 0.855
GLYMA09G09291 Glycine max GLYMA09G09291 N 0.855
AT3G17450 Arabidopsis thaliana AT3G17450 N 0.855
GSMUA_Achr3G12820_001 Musa acuminata GSMUA_Achr3G12820_001 N 0.855
GLYMA15G21351 Glycine max GLYMA15G21351 N 0.843
LjT35D18.120.nc Lotus japonicus LjT35D18.120.nc N 0.843
Pm008491 Prunus mume Pm008491 N 0.831
29889.m003394 Ricinus communis 29889.m003394 N 0.831
PRUPE_ppa001126mg Prunus persica PRUPE_ppa001126mg N 0.831
PK21594.1 Cannabis sativa PK21594.1 N 0.831
MDP0000133479 Malus domestica MDP0000133479 N 0.821
MDP0000314867 Malus domestica MDP0000314867 N 0.821
TCM_021492 Theobroma cacao TCM_021492 N 0.819
Bo00763s120 Brassica oleracea Bo00763s120 N 0.815
Cucsa.252180 Cucumis sativus Cucsa.252180 N 0.810
gene22812-v1.0-hybrid Fragaria vesca gene22812-v1.0-hybrid N 0.798