Thhalv10022530m.g (Eutrema salsugineum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Thhalv10022530m.g T028723_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10022530m BED ZF 66 124

Links

Other BED ZF family TFs
Other Eutrema salsugineum TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HAT Arabidopsis thaliana AT3G42170 N 0.721
Bo4g107870 Brassica oleracea Bo4g107870 N 0.886
Bo6g067130 Brassica oleracea Bo6g067130 N 0.886
Bo8g066350 Brassica oleracea Bo8g066350 N 0.705
Bostr.0556s0643 Boechera stricta Bostr.0556s0643 N 0.721
Bostr.20129s0513 Boechera stricta Bostr.20129s0513 N 0.909
Cagra.13611s0003 Capsella grandiflora Cagra.13611s0003 N 0.705
Cagra.1725s0137 Capsella grandiflora Cagra.1725s0137 N 0.886
Carubv10008021m.g Capsella rubella Carubv10008021m.g N 0.705
Carubv10019720m.g Capsella rubella Carubv10019720m.g N 0.886
cassava11655.m1 Manihot esculenta cassava11655.m1 N 0.750
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.727
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N 0.750
Eucgr.F03885 Eucalyptus grandis Eucgr.F03885 N 0.773
fgenesh1_pm.C_scaffold_5000603 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5000603 N 0.705
gene15718-v1.0-hybrid Fragaria vesca gene15718-v1.0-hybrid N 0.727
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N 0.727
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N 0.727
GLYMA13G22855 Glycine max GLYMA13G22855 N 0.750
GLYMA13G22881 Glycine max GLYMA13G22881 N 0.750
GLYMA17G11981 Glycine max GLYMA17G11981 N 0.727
Gorai.004G107300 Gossypium raimondii Gorai.004G107300 N 0.705
GSMUA_Achr3G02770_001 Musa acuminata GSMUA_Achr3G02770_001 N 0.714
MDP0000394762 Malus domestica MDP0000394762 N 0.727
mgf010516m Mimulus guttatus mgf010516m N 0.727
mgf025287m Mimulus guttatus mgf025287m N 0.727
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.727
PGSC0003DMG400019816 Solanum tuberosum PGSC0003DMG400019816 N 0.727
PK27100.1 Cannabis sativa PK27100.1 N 0.727
Pm013703 Prunus mume Pm013703 N 0.750
POPTR_0001s20900 Populus trichocarpa POPTR_0001s20900 N 0.750
POPTR_0003s02610 Populus trichocarpa POPTR_0003s02610 N 0.750
POPTR_0004s12760 Populus trichocarpa POPTR_0004s12760 N 0.721
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N 0.705
PRUPE_ppa002495mg Prunus persica PRUPE_ppa002495mg N 0.750
SapurV1A.0197s0170 Salix purpurea SapurV1A.0197s0170 N 0.727
SapurV1A.0199s0250 Salix purpurea SapurV1A.0199s0250 N 0.750
SapurV1A.0344s0280 Salix purpurea SapurV1A.0344s0280 N 0.750
Si000401m.g Setaria italica Si000401m.g N 0.705
Solyc03g116840.1 Solanum lycopersicum Solyc03g116840.1 N 0.727
TCM_038144 Theobroma cacao TCM_038144 N 0.705
Thhalv10009614m.g Eutrema salsugineum Thhalv10009614m.g N 0.705
VIT_09s0002g07340 Vitis vinifera VIT_09s0002g07340 N 0.750
VIT_11s0016g05750 Vitis vinifera VIT_11s0016g05750 N 0.705