PK13949.1 (Cannabis sativa)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 PK13949.1 T028800_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK13949.1 BED ZF 19 69

Links

Other BED ZF family TFs
Other Cannabis sativa TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA18G12556 Glycine max GLYMA18G12556 N 0.977
GLYMA08G42321 Glycine max GLYMA08G42321 N 0.977
Cucsa.185330 Cucumis sativus Cucsa.185330 N 0.930
VIT_12s0142g00390 Vitis vinifera VIT_12s0142g00390 N 0.907
Pm014562 Prunus mume Pm014562 N 0.881
PRUPE_ppa002590mg Prunus persica PRUPE_ppa002590mg N 0.881
gene24495-v1.0-hybrid Fragaria vesca gene24495-v1.0-hybrid N 0.881
Eucgr.K01194 Eucalyptus grandis Eucgr.K01194 N 0.864
cassava35563.valid.m1 Manihot esculenta cassava35563.valid.m1 N 0.864
TCM_001836 Theobroma cacao TCM_001836 N 0.860
PGSC0003DMG400021240 Solanum tuberosum PGSC0003DMG400021240 N 0.860
Solyc10g007810.2 Solanum lycopersicum Solyc10g007810.2 N 0.860
Gorai.012G042700 Gossypium raimondii Gorai.012G042700 N 0.860
cassava21091.m1 Manihot esculenta cassava21091.m1 N 0.837
Carubv10022346m.g Capsella rubella Carubv10022346m.g N 0.810
Bostr.10273s0360 Boechera stricta Bostr.10273s0360 N 0.810
Cagra.10840s0006 Capsella grandiflora Cagra.10840s0006 N 0.810
mgf000829m Mimulus guttatus mgf000829m N 0.773
Thhalv10018229m.g Eutrema salsugineum Thhalv10018229m.g N 0.727
Aquca_039_00001 Aquilegia coerulea Aquca_039_00001 N 0.721
Bo6g110620 Brassica oleracea Bo6g110620 N 0.714
Bo1g129970 Brassica oleracea Bo1g129970 N 0.705
Thhalv10020233m.g Eutrema salsugineum Thhalv10020233m.g N 0.705
Bostr.28625s0227 Boechera stricta Bostr.28625s0227 N 0.705
Cagra.0007s0024 Capsella grandiflora Cagra.0007s0024 N 0.705
Carubv10013145m.g Capsella rubella Carubv10013145m.g N 0.705