PK21594.1 (Cannabis sativa)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 PK21594.1 T028803_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK21594.1 BED ZF 27 74
PK21594.1 BED ZF 152 201

Links

Other BED ZF family TFs
Other Cannabis sativa TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.252180 Cucumis sativus Cucsa.252180 N 0.952
Pm008491 Prunus mume Pm008491 N 0.917
PRUPE_ppa001126mg Prunus persica PRUPE_ppa001126mg N 0.917
MDP0000133479 Malus domestica MDP0000133479 N 0.917
MDP0000314867 Malus domestica MDP0000314867 N 0.917
VIT_05s0020g00790 Vitis vinifera VIT_05s0020g00790 N 0.904
gene22812-v1.0-hybrid Fragaria vesca gene22812-v1.0-hybrid N 0.893
TCM_021492 Theobroma cacao TCM_021492 N 0.881
29889.m003394 Ricinus communis 29889.m003394 N 0.880
GLYMA09G09291 Glycine max GLYMA09G09291 N 0.880
Cagra.4396s0051 Capsella grandiflora Cagra.4396s0051 N 0.869
Carubv10013083m.g Capsella rubella Carubv10013083m.g N 0.869
GLYMA15G21351 Glycine max GLYMA15G21351 N 0.869
Bostr.19424s0919 Boechera stricta Bostr.19424s0919 N 0.869
Thhalv10020031m.g Eutrema salsugineum Thhalv10020031m.g N 0.869
GSMUA_Achr3G12820_001 Musa acuminata GSMUA_Achr3G12820_001 N 0.869
Eucgr.B02527 Eucalyptus grandis Eucgr.B02527 N 0.857
LjT35D18.120.nc Lotus japonicus LjT35D18.120.nc N 0.857
Bo00763s120 Brassica oleracea Bo00763s120 N 0.852
POPTR_0014s10940 Populus trichocarpa POPTR_0014s10940 N 0.845
orange1.1g044693m.g Citrus sinensis orange1.1g044693m.g N 0.845
Ciclev10024195m.g Citrus clementina Ciclev10024195m.g N 0.845
AT3G17450 Arabidopsis thaliana AT3G17450 N 0.845
TCM_004927 Theobroma cacao TCM_004927 N 0.845
SapurV1A.0294s0300 Salix purpurea SapurV1A.0294s0300 N 0.845
Aquca_029_00055 Aquilegia coerulea Aquca_029_00055 N 0.833
cassava36089.valid.m1 Manihot esculenta cassava36089.valid.m1 N 0.833
Gorai.008G135400 Gossypium raimondii Gorai.008G135400 N 0.833
SapurV1A.0014s0420 Salix purpurea SapurV1A.0014s0420 N 0.831
POPTR_0002s18950 Populus trichocarpa POPTR_0002s18950 N 0.821
evm.TU.supercontig_519.2 Carica papaya evm.TU.supercontig_519.2 N 0.821