PK28412.1 (Cannabis sativa)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 PK28412.1 T028808_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK28412.1 BED ZF 52 109

Links

Other BED ZF family TFs
Other Cannabis sativa TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0199s0250 Salix purpurea SapurV1A.0199s0250 N 0.795
Eucgr.F03885 Eucalyptus grandis Eucgr.F03885 N 0.795
cassava11655.m1 Manihot esculenta cassava11655.m1 N 0.795
POPTR_0003s02610 Populus trichocarpa POPTR_0003s02610 N 0.795
SapurV1A.0344s0280 Salix purpurea SapurV1A.0344s0280 N 0.795
POPTR_0001s20900 Populus trichocarpa POPTR_0001s20900 N 0.795
VIT_09s0002g07340 Vitis vinifera VIT_09s0002g07340 N 0.795
Solyc03g116840.1 Solanum lycopersicum Solyc03g116840.1 N 0.773
PGSC0003DMG400019816 Solanum tuberosum PGSC0003DMG400019816 N 0.773
Gorai.010G137500 Gossypium raimondii Gorai.010G137500 N 0.750
TCM_027266 Theobroma cacao TCM_027266 N 0.750
gene15718-v1.0-hybrid Fragaria vesca gene15718-v1.0-hybrid N 0.727
Pm013703 Prunus mume Pm013703 N 0.727
PRUPE_ppa002495mg Prunus persica PRUPE_ppa002495mg N 0.727
PK27100.1 Cannabis sativa PK27100.1 N 0.705
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.705
orange1.1g005485m.g Citrus sinensis orange1.1g005485m.g N 0.705
mgf025287m Mimulus guttatus mgf025287m N 0.705
Bo4g107870 Brassica oleracea Bo4g107870 N 0.705
Cucsa.096030 Cucumis sativus Cucsa.096030 N 0.705
Cucsa.036140 Cucumis sativus Cucsa.036140 N 0.705
Bostr.20129s0513 Boechera stricta Bostr.20129s0513 N 0.705
Cagra.1725s0137 Capsella grandiflora Cagra.1725s0137 N 0.705
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.705
Carubv10019720m.g Capsella rubella Carubv10019720m.g N 0.705
Ciclev10025036m.g Citrus clementina Ciclev10025036m.g N 0.705