zbed4 (Xenopus tropicalis)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 XB-GENE-6076969 T028875_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002932232 BED ZF 104 152
XP_002932232 BED ZF 268 316
XP_002932232 BED ZF 441 488
XP_002932232 BED ZF 540 588
XP_002932234 BED ZF 104 152
XP_002932234 BED ZF 268 316
XP_002932234 BED ZF 441 488
XP_002932234 BED ZF 540 588

Links

Other BED ZF family TFs
Other Xenopus tropicalis TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
XP_002932233 Xenopus tropicalis XP_002932233 N 1.000
Aan_R000409 Calypte anna Aan_R000409 N 0.966
ZBED4 Monodelphis domestica ENSMODG00000025433 N 0.966
ENSMEUG00000014660 Macropus eugenii ENSMEUG00000014660 N 0.966
ENSAPLG00000001579 Anas platyrhynchos ENSAPLG00000001579 N 0.960
ENSGALG00000008547 Gallus gallus ENSGALG00000008547 N 0.960
Tal_R001537 Tyto alba Tal_R001537 N 0.960
Afo_R004342 Aptenodytes forsteri Afo_R004342 N 0.955
Brh_R004716 Buceros rhinoceros Brh_R004716 N 0.955
ENSFALG00000015280 Ficedula albicollis ENSFALG00000015280 N 0.949
Gfo_R008679 Geospiza fortis Gfo_R008679 N 0.949
ZBED4 Anolis carolinensis ENSACAG00000009133 N 0.943
ENSPSIG00000007193 Pelodiscus sinensis ENSPSIG00000007193 N 0.943
Pvit_16079 Pogona vitticeps Pvit_16079 N 0.932
ENSLACG00000007168 Latimeria chalumnae ENSLACG00000007168 N 0.932
ENSPANG00000010852 Papio anubis ENSPANG00000010852 N 0.926
ENSP00000216268 Macaca fascicularis ENSP00000216268 N 0.926
ENSCSAG00000019288 Chlorocebus sabaeus ENSCSAG00000019288 N 0.926
ZBED4 Macaca mulatta ENSMMUG00000018833 N 0.926
ZBED4 Homo sapiens ENSG00000100426 N 0.920
ENSPPYG00000011967 Pongo abelii ENSPPYG00000011967 N 0.920
ENSCPOG00000007711 Cavia porcellus ENSCPOG00000007711 N 0.920
ZBED4 Gorilla gorilla ENSGGOG00000009913 N 0.920
ZBED4 Otolemur garnettii ENSOGAG00000013251 N 0.920
ENSNLEG00000018235 Nomascus leucogenys ENSNLEG00000018235 N 0.920
ZBED4 Loxodonta africana ENSLAFG00000017972 N 0.920
Zbed4 Rattus norvegicus ENSRNOG00000004588 N 0.915
ZBED4 Tursiops truncatus ENSTTRG00000009815 N 0.915
Zbed4 Mus musculus ENSMUSG00000034333 N 0.915
ZBED4 Pan troglodytes ENSPTRG00000014522 N 0.915
ENSSTOG00000023379 Ictidomys tridecemlineatus ENSSTOG00000023379 N 0.909
ENSOCUG00000029472 Oryctolagus cuniculus ENSOCUG00000029472 N 0.909
ENSMPUG00000018768 Mustela putorius furo ENSMPUG00000018768 N 0.903
ZBED4 Canis familiaris ENSCAFG00000000714 N 0.903
ZBED4 Dasypus novemcinctus ENSDNOG00000018932 N 0.892
ZBED4 Pteropus vampyrus ENSPVAG00000005134 N 0.884
Myotis_brandtii_ZBED4_10004868 Myotis brandtii Myotis_brandtii_ZBED4_10004868 N 0.881
zbed4 Danio rerio ENSDARG00000024306 N 0.875
ENSLOCG00000017908 Lepisosteus oculatus ENSLOCG00000017908 N 0.875
ENSAMXG00000025839 Astyanax mexicanus ENSAMXG00000025839 N 0.864
ENSONIG00000009795 Oreochromis niloticus ENSONIG00000009795 N 0.858
zbed4 Tetraodon nigroviridis ENSTNIG00000006775 N 0.858
zbed4 Gasterosteus aculeatus ENSGACG00000019008 N 0.852
ENSPFOG00000020326 Poecilia formosa ENSPFOG00000020326 N 0.841
ENSXMAG00000019580 Xiphophorus maculatus ENSXMAG00000019580 N 0.841