LjT35D18.120.nc (Lotus japonicus)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 LjT35D18.120.nc T028945_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LjT35D18.120.nc BED ZF 11 58
LjT35D18.120.nc BED ZF 133 180

Links

Other BED ZF family TFs
Other Lotus japonicus TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA15G21351 Glycine max GLYMA15G21351 N 0.988
GLYMA09G09291 Glycine max GLYMA09G09291 N 0.988
VIT_05s0020g00790 Vitis vinifera VIT_05s0020g00790 N 0.952
Cagra.4396s0051 Capsella grandiflora Cagra.4396s0051 N 0.928
Carubv10013083m.g Capsella rubella Carubv10013083m.g N 0.928
Bostr.19424s0919 Boechera stricta Bostr.19424s0919 N 0.928
Thhalv10020031m.g Eutrema salsugineum Thhalv10020031m.g N 0.928
29889.m003394 Ricinus communis 29889.m003394 N 0.928
AT3G17450 Arabidopsis thaliana AT3G17450 N 0.904
Bo00763s120 Brassica oleracea Bo00763s120 N 0.901
GSMUA_Achr3G12820_001 Musa acuminata GSMUA_Achr3G12820_001 N 0.893
TCM_021492 Theobroma cacao TCM_021492 N 0.892
MDP0000314867 Malus domestica MDP0000314867 N 0.881
MDP0000133479 Malus domestica MDP0000133479 N 0.881
orange1.1g044693m.g Citrus sinensis orange1.1g044693m.g N 0.869
Ciclev10024195m.g Citrus clementina Ciclev10024195m.g N 0.869
Aquca_029_00055 Aquilegia coerulea Aquca_029_00055 N 0.869
TCM_004927 Theobroma cacao TCM_004927 N 0.869
Cucsa.252180 Cucumis sativus Cucsa.252180 N 0.869
POPTR_0014s10940 Populus trichocarpa POPTR_0014s10940 N 0.867
SapurV1A.0294s0300 Salix purpurea SapurV1A.0294s0300 N 0.867
PRUPE_ppa001126mg Prunus persica PRUPE_ppa001126mg N 0.857
gene22812-v1.0-hybrid Fragaria vesca gene22812-v1.0-hybrid N 0.857
PK21594.1 Cannabis sativa PK21594.1 N 0.857
cassava36089.valid.m1 Manihot esculenta cassava36089.valid.m1 N 0.857
Pm008491 Prunus mume Pm008491 N 0.857
Eucgr.B02527 Eucalyptus grandis Eucgr.B02527 N 0.845
evm.TU.supercontig_519.2 Carica papaya evm.TU.supercontig_519.2 N 0.845
SapurV1A.0014s0420 Salix purpurea SapurV1A.0014s0420 N 0.843
Gorai.008G135400 Gossypium raimondii Gorai.008G135400 N 0.833
POPTR_0002s18950 Populus trichocarpa POPTR_0002s18950 N 0.833