CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPLM_0000898801
(
Haemonchus placei
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
HPLM_0000898801
T029393_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0000898801-mRNA-1
BED ZF
218
257
VTEYIEHLKEKLQRNECIYCEKTFGDRNVLMDHMRKRNHR
HPLM_0000898801-mRNA-1
BED ZF
312
347
QEDNVDADETRVVCLLCHESDDTAEGLLAHMKEKHE
HPLM_0000898801-mRNA-1
BED ZF
362
402
YQRMKLINYIRKQNFHAICFVCQRNDLGNTQELAKHLQEHE
Links
Other
BED ZF
family TFs
Other
Haemonchus placei
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI00479300
Haemonchus contortus
HCOI00479300
N
1.000
HCOI01827300
Haemonchus contortus
HCOI01827300
N
0.989
ANCCAN_25995
Ancylostoma caninum
ANCCAN_25995
N
0.885
ANCDUO_06205
Ancylostoma duodenale
ANCDUO_06205
N
0.875
NBR_0001751501
Nippostrongylus brasiliensis
NBR_0001751501
N
0.865
NECAME_13887
Necator americanus
NECAME_13887
N
0.849
HPBE_0002067501
Heligmosomoides bakeri
HPBE_0002067501
N
0.848
OESDEN_04759
Oesophagostomum dentatum
OESDEN_04759
N
0.846
OESDEN_15339
Oesophagostomum dentatum
OESDEN_15339
N
0.841
ANCCEY_12439
Ancylostoma ceylanicum
ANCCEY_12439
N
0.822