L596_g13737 (Steinernema carpocapsae)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 L596_g13737 T029399_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bed-3
M00587_2.00
Caenorhabditis elegans
TCGRGANY

RNTCYCGA
PBM
Narasimhan et al.(2015)
pTH9056
0.818 0.818
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g13737.t1 BED ZF 63 107

Links

Other BED ZF family TFs
Other Steinernema carpocapsae TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g03085 Acanthocheilonema viteae nAv.1.0.1.g03085 I 0.773
ANCCEY_10600 Ancylostoma ceylanicum ANCCEY_10600 I 0.841
ASIM_0001651901 Anisakis simplex ASIM_0001651901 I 0.864
ALUE_0002184101 Ascaris lumbricoides ALUE_0002184101 I 0.841
ASU_08993 Ascaris suum ASU_08993 I 0.864
Bm3595 Brugia malayi Bm3595 I 0.773
BXY_0004700 Bursaphelenchus xylophilus BXY_0004700 N 0.705
CBN28223 Caenorhabditis brenneri CBN28223 I 0.818
CBN11928 Caenorhabditis brenneri CBN11928 I 0.818
CBG03458 Caenorhabditis briggsae CBG03458 I 0.818
bed-3 Caenorhabditis elegans WBGene00009133 D 0.818
CJA17936 Caenorhabditis japonica CJA17936 I 0.818
CRE29878 Caenorhabditis remanei CRE29878 I 0.818
CRE01489 Caenorhabditis remanei CRE01489 I 0.818
CGOC_0000021801 Cylicostephanus goldi CGOC_0000021801 I 0.841
nDi.2.2.2.g02831 Dirofilaria immitis nDi.2.2.2.g02831 I 0.773
DME_0000322601 Dracunculus medinensis DME_0000322601 I 0.818
EVEC_0000803501 Enterobius vermicularis EVEC_0000803501 I 0.818
GPLIN_000014500 Globodera pallida GPLIN_000014500 I 0.818
Hba_14997 Heterorhabditis bacteriophora Hba_14997 I 0.841
nLs.2.1.2.g03792 Litomosoides sigmodontis nLs.2.1.2.g03792 I 0.773
LOAG_01923 Loa loa LOAG_01923 I 0.773
NECAME_07822 Necator americanus NECAME_07822 I 0.841
OESDEN_02515 Oesophagostomum dentatum OESDEN_02515 I 0.841
nOo.2.0.1.g00032 Onchocerca ochengi nOo.2.0.1.g00032 I 0.773
WBGene00241796 Onchocerca volvulus WBGene00241796 I 0.773
PEQ_0001129601 Parascaris equorum PEQ_0001129601 I 0.783
PTRK_0000487800 Parastrongyloides trichosuri PTRK_0000487800 I 0.841
scaffold140-EXSNAP2012.77 Pristionchus exspectatus scaffold140-EXSNAP2012.77 I 0.795
RSKR_0000579600 Rhabditophanes kr3021 RSKR_0000579600 I 0.841
L889_g10141 Steinernema feltiae L889_g10141 I 1.000
L893_g7390 Steinernema glaseri L893_g7390 I 1.000
L898_g15300 Steinernema monticolum L898_g15300 I 1.000
L892_g25347 Steinernema scapterisci L892_g25347 I 1.000
SPAL_0001677600 Strongyloides papillosus SPAL_0001677600 I 0.841
SSTP_0001230300 Strongyloides stercoralis SSTP_0001230300 I 0.841
SVE_1688100 Strongyloides venezuelensis SVE_1688100 I 0.841
SMUV_0001051801 Syphacia muris SMUV_0001051801 I 0.818
WUBG_08027 Wuchereria bancrofti WUBG_08027 I 0.773