CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g09085
(
Acanthocheilonema viteae
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
nAv.1.0.1.g09085
T029532_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t09085-RA
BED ZF
284
323
NPVWPYFMVKDGVATCKHCNYSTKSVFSTNLKVHLRTHHH
nAv.1.0.1.t09085-RA
BED ZF
557
599
HPVWRFFKDVGDGSKTVKCVNCPFSTSSPFSTNLKMHLKAHHK
Links
Other
BED ZF
family TFs
Other
Acanthocheilonema viteae
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nDi.2.2.2.g00142
Dirofilaria immitis
nDi.2.2.2.g00142
N
0.988
LOAG_17673
Loa loa
LOAG_17673
N
0.988
EEL_0000246901
Elaeophora elaphi
EEL_0000246901
N
0.976
nLs.2.1.2.g08165
Litomosoides sigmodontis
nLs.2.1.2.g08165
N
0.976
Bm4541
Brugia malayi
Bm4541
N
0.976
WBGene00245587
Onchocerca volvulus
WBGene00245587
N
0.976
TCLT_0000679601
Thelazia callipaeda
TCLT_0000679601
N
0.892
nOo.2.0.1.g06019
Onchocerca ochengi
nOo.2.0.1.g06019
N
0.892
ASU_04966
Ascaris suum
ASU_04966
N
0.807
ALUE_0000590301
Ascaris lumbricoides
ALUE_0000590301
N
0.807
SMUV_0000711101
Syphacia muris
SMUV_0000711101
N
0.795
EVEC_0000342301
Enterobius vermicularis
EVEC_0000342301
N
0.795
ASIM_0001676401
Anisakis simplex
ASIM_0001676401
N
0.783
Ppa-gei-13
Pristionchus pacificus
PPA19882
N
0.747
CBG10038
Caenorhabditis briggsae
CBG10038
N
0.741
CBN24253
Caenorhabditis brenneri
CBN24253
N
0.741
CRE25566
Caenorhabditis remanei
CRE25566
N
0.741
Hba_11216
Heterorhabditis bacteriophora
Hba_11216
N
0.735
HCOI00039700
Haemonchus contortus
HCOI00039700
N
0.735
CJA06713
Caenorhabditis japonica
CJA06713
N
0.723
gei-13
Caenorhabditis elegans
WBGene00001570
N
0.723