CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
nOo.2.0.1.g06019
(
Onchocerca ochengi
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
nOo.2.0.1.g06019
T029583_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nOo.2.0.1.t06019-RA
BED ZF
154
186
NPVWPYFIVKDGVATCKYCNYSTKSVFSTNLKV
nOo.2.0.1.t06019-RA
BED ZF
421
463
HPVWRFFKDVGDGSKTVKCVNCPFSTSSPFSTNLKMHLKAHHK
Links
Other
BED ZF
family TFs
Other
Onchocerca ochengi
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nDi.2.2.2.g00142
Dirofilaria immitis
nDi.2.2.2.g00142
N
0.974
Bm4541
Brugia malayi
Bm4541
N
0.974
WBGene00245587
Onchocerca volvulus
WBGene00245587
N
0.916
TCLT_0000679601
Thelazia callipaeda
TCLT_0000679601
N
0.908
LOAG_17673
Loa loa
LOAG_17673
N
0.904
nAv.1.0.1.g09085
Acanthocheilonema viteae
nAv.1.0.1.g09085
N
0.892
nLs.2.1.2.g08165
Litomosoides sigmodontis
nLs.2.1.2.g08165
N
0.880
EEL_0000246901
Elaeophora elaphi
EEL_0000246901
N
0.880
ASU_04966
Ascaris suum
ASU_04966
N
0.803
ALUE_0000590301
Ascaris lumbricoides
ALUE_0000590301
N
0.803
EVEC_0000342301
Enterobius vermicularis
EVEC_0000342301
N
0.789
SMUV_0000711101
Syphacia muris
SMUV_0000711101
N
0.789
ASIM_0001676401
Anisakis simplex
ASIM_0001676401
N
0.776
Hba_11216
Heterorhabditis bacteriophora
Hba_11216
N
0.737
Ppa-gei-13
Pristionchus pacificus
PPA19882
N
0.716