PEQ_0001129601 (Parascaris equorum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 PEQ_0001129601 T029638_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bed-3
M00587_2.00
Caenorhabditis elegans
TCGRGANY

RNTCYCGA
PBM
Narasimhan et al.(2015)
pTH9056
0.826 0.826
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PEQ_0001129601-mRNA-1 BED ZF 9 33

Links

Other BED ZF family TFs
Other Parascaris equorum TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ASU_08993 Ascaris suum ASU_08993 I 0.957
ASIM_0001651901 Anisakis simplex ASIM_0001651901 I 0.957
bed-3 Caenorhabditis elegans WBGene00009133 D 0.826
DME_0000322601 Dracunculus medinensis DME_0000322601 I 0.826
SMUV_0001051801 Syphacia muris SMUV_0001051801 I 0.826
CRE29878 Caenorhabditis remanei CRE29878 I 0.826
EVEC_0000803501 Enterobius vermicularis EVEC_0000803501 I 0.826
CBN11928 Caenorhabditis brenneri CBN11928 I 0.826
CBG03458 Caenorhabditis briggsae CBG03458 I 0.826
CRE01489 Caenorhabditis remanei CRE01489 I 0.826
CBN28223 Caenorhabditis brenneri CBN28223 I 0.826
CJA17936 Caenorhabditis japonica CJA17936 I 0.826
nAv.1.0.1.g03085 Acanthocheilonema viteae nAv.1.0.1.g03085 I 0.783
L898_g15300 Steinernema monticolum L898_g15300 I 0.783
nDi.2.2.2.g02831 Dirofilaria immitis nDi.2.2.2.g02831 I 0.783
Bm3595 Brugia malayi Bm3595 I 0.783
scaffold140-EXSNAP2012.77 Pristionchus exspectatus scaffold140-EXSNAP2012.77 I 0.783
nOo.2.0.1.g00032 Onchocerca ochengi nOo.2.0.1.g00032 I 0.783
nLs.2.1.2.g03792 Litomosoides sigmodontis nLs.2.1.2.g03792 I 0.783
L893_g7390 Steinernema glaseri L893_g7390 I 0.783
LOAG_01923 Loa loa LOAG_01923 I 0.783
L892_g25347 Steinernema scapterisci L892_g25347 I 0.783
WUBG_08027 Wuchereria bancrofti WUBG_08027 I 0.783
L596_g13737 Steinernema carpocapsae L596_g13737 I 0.783
L889_g10141 Steinernema feltiae L889_g10141 I 0.783
WBGene00241796 Onchocerca volvulus WBGene00241796 I 0.783
SVE_1688100 Strongyloides venezuelensis SVE_1688100 I 0.739
SPAL_0001677600 Strongyloides papillosus SPAL_0001677600 I 0.739
SSTP_0001230300 Strongyloides stercoralis SSTP_0001230300 I 0.739
PTRK_0000487800 Parastrongyloides trichosuri PTRK_0000487800 I 0.739
ANCDUO_22610 Ancylostoma duodenale ANCDUO_22610 I 0.739
RSKR_0000579600 Rhabditophanes kr3021 RSKR_0000579600 I 0.739