CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig147.frz3.gene32
(
Meloidogyne hapla
)
bHLH,EBF1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
PF16422 (COE1_DBD)
IPR001092
(none)
MhA1_Contig147.frz3.gene32
T029797_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig147.frz3.gene32
EBF1
52
218
IKSEHSAASQLFCWSNVQPMLQNCVGQLAKAKFEHPPPSNLRKSNFFHFTINLLDHGDNPVEVEQATFTGFVEKGKEVPGENTRNGIHYKLVLLFNNGEKGIRTEQDLYVRLVDSQTKQAIAYEGQDKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDPVMLSM
MhA1_Contig147.frz3.gene32
EBF1
214
248
VMLSMSPRVDMDVLAVSENMFVHNNSKHGRRIKRG
MhA1_Contig147.frz3.gene32
bHLH
358
392
SNIDSAFLRLQRLLRQPADPERLSKEMILRRAADL
Links
Other
bHLH,EBF1
family TFs
Other
Meloidogyne hapla
TFs
0 Related TFs
">No related TF found