AMTR_s00001p00272070 (Amborella trichopoda)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AMTR_s00001p00272070 T030464_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERM96627 bHLH 187 238

Links

Other bHLH family TFs
Other Amborella trichopoda TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_55.64 Carica papaya evm.TU.supercontig_55.64 N 0.887
AMTR_s00089p00043950 Amborella trichopoda AMTR_s00089p00043950 N 0.886
Pavir.Ba01963 Panicum virgatum Pavir.Ba01963 N 0.883
TRIUR3_09788 Triticum urartu TRIUR3_09788 N 0.883
Si013925m.g Setaria italica Si013925m.g N 0.883
GSMUA_Achr10G30300_001 Musa acuminata GSMUA_Achr10G30300_001 N 0.883
GSMUA_Achr5G05450_001 Musa acuminata GSMUA_Achr5G05450_001 N 0.883
GSMUA_Achr7G12790_001 Musa acuminata GSMUA_Achr7G12790_001 N 0.882
e_gw1.519.9.1 Physcomitrella patens e_gw1.519.9.1 N 0.871
Aquca_010_00112 Aquilegia coerulea Aquca_010_00112 N 0.870
Pm002111 Prunus mume Pm002111 N 0.863
PRUPE_ppa020862mg Prunus persica PRUPE_ppa020862mg N 0.863
MDP0000229007 Malus domestica MDP0000229007 N 0.863
VIT_07s0191g00240 Vitis vinifera VIT_07s0191g00240 N 0.862
GSMUA_Achr5G17900_001 Musa acuminata GSMUA_Achr5G17900_001 N 0.861
BRADI4G32650 Brachypodium distachyon BRADI4G32650 N 0.861
Bra037414 Brassica rapa Bra037414 N 0.860
Carubv10001470m.g Capsella rubella Carubv10001470m.g N 0.860
Cagra.10175s0007 Capsella grandiflora Cagra.10175s0007 N 0.860
Bostr.7365s0007 Boechera stricta Bostr.7365s0007 N 0.860
Bo9g004020 Brassica oleracea Bo9g004020 N 0.860
BHLH57 Arabidopsis thaliana AT4G01460 N 0.860
Thhalv10028815m.g Eutrema salsugineum Thhalv10028815m.g N 0.860
ORUFI03G06370 Oryza rufipogon ORUFI03G06370 N 0.859
MLOC_67417 Hordeum vulgare MLOC_67417 N 0.859
LPERR03G05820 Leersia perrieri LPERR03G05820 N 0.859
OBART03G06470 Oryza barthii OBART03G06470 N 0.859
GSMUA_Achr6G10290_001 Musa acuminata GSMUA_Achr6G10290_001 N 0.859
BGIOSGA012015 Oryza indica BGIOSGA012015 N 0.859
OS03G0188400 Oryza sativa OS03G0188400 N 0.859
OGLUM03G06480 Oryza glumaepatula OGLUM03G06480 N 0.859
OMERI03G06350 Oryza meridionalis OMERI03G06350 N 0.859
OLONG_001045 Oryza longistaminata OLONG_001045 N 0.859
ORGLA03G0062600 Oryza glaberrima ORGLA03G0062600 N 0.859
ONIVA02G06380 Oryza nivara ONIVA02G06380 N 0.859
GSMUA_Achr10G19180_001 Musa acuminata GSMUA_Achr10G19180_001 N 0.857
SELMODRAFT_428659 Selaginella moellendorffii SELMODRAFT_428659 N 0.856
POPTR_0017s08160 Populus trichocarpa POPTR_0017s08160 N 0.856
Solyc08g076820.2 Solanum lycopersicum Solyc08g076820.2 N 0.856
PGSC0003DMG400017540 Solanum tuberosum PGSC0003DMG400017540 N 0.856
FMA Arabidopsis lyrata scaffold_302925.1 N 0.856
PRUPE_ppa020429mg Prunus persica PRUPE_ppa020429mg N 0.856
Ca_12363 Cicer arietinum Ca_12363 N 0.856
SELMODRAFT_430716 Selaginella moellendorffii SELMODRAFT_430716 N 0.856
PRUPE_ppa017746mg Prunus persica PRUPE_ppa017746mg N 0.856
TCM_015694 Theobroma cacao TCM_015694 N 0.856
Solyc09g091760.1 Solanum lycopersicum Solyc09g091760.1 N 0.856
POPTR_0001s32160 Populus trichocarpa POPTR_0001s32160 N 0.856
FMA Vitis vinifera VIT_05s0029g00050 N 0.856
PGSC0003DMG400029634 Solanum tuberosum PGSC0003DMG400029634 N 0.856
Solyc05g053660.1 Solanum lycopersicum Solyc05g053660.1 N 0.856
Ca_16010 Cicer arietinum Ca_16010 N 0.856
29904.m002956 Ricinus communis 29904.m002956 N 0.856
Gorai.008G225800 Gossypium raimondii Gorai.008G225800 N 0.856
Gorai.011G159100 Gossypium raimondii Gorai.011G159100 N 0.856
Gorai.006G217200 Gossypium raimondii Gorai.006G217200 N 0.856
gene02199-v1.0-hybrid Fragaria vesca gene02199-v1.0-hybrid N 0.856
evm.TU.supercontig_59.132 Carica papaya evm.TU.supercontig_59.132 N 0.856
Lus10016680.g Linum usitatissimum Lus10016680.g N 0.856
MDP0000646823 Malus domestica MDP0000646823 N 0.856
PK04856.1 Cannabis sativa PK04856.1 N 0.856
PK28391.1 Cannabis sativa PK28391.1 N 0.856
Thhalv10002558m.g Eutrema salsugineum Thhalv10002558m.g N 0.856
SapurV1A.0462s0070 Salix purpurea SapurV1A.0462s0070 N 0.856
orange1.1g014477m.g Citrus sinensis orange1.1g014477m.g N 0.856
Eucgr.E00273 Eucalyptus grandis Eucgr.E00273 N 0.856
Ciclev10005031m.g Citrus clementina Ciclev10005031m.g N 0.856
30054.m000819 Ricinus communis 30054.m000819 N 0.856
cassava27750.m1 Manihot esculenta cassava27750.m1 N 0.856
PGSC0003DMG400015760 Solanum tuberosum PGSC0003DMG400015760 N 0.856
Pm023207 Prunus mume Pm023207 N 0.856
Pm009474 Prunus mume Pm009474 N 0.856
cassava27856.m1 Manihot esculenta cassava27856.m1 N 0.856
Cucsa.256420 Cucumis sativus Cucsa.256420 N 0.856
Cagra.0026s0026 Capsella grandiflora Cagra.0026s0026 N 0.856
Carubv10013821m.g Capsella rubella Carubv10013821m.g N 0.856
Bostr.19424s0222 Boechera stricta Bostr.19424s0222 N 0.856
Aquca_034_00130 Aquilegia coerulea Aquca_034_00130 N 0.856
mgf015694m Mimulus guttatus mgf015694m N 0.856
Cla021744 Citrullus lanatus Cla021744 N 0.856
TCM_020336 Theobroma cacao TCM_020336 N 0.856
Bo3g082010 Brassica oleracea Bo3g082010 N 0.856
FAMA Arabidopsis thaliana AT3G24140 N 0.856
GLYMA01G23230 Glycine max GLYMA01G23230 N 0.856
Bra028357 Brassica rapa Bra028357 N 0.856
Bra001929 Brassica rapa Bra001929 N 0.856
MTR_8g066770 Medicago truncatula MTR_8g066770 N 0.856
GLYMA02G14290 Glycine max GLYMA02G14290 N 0.856
Bo7g037540 Brassica oleracea Bo7g037540 N 0.856
GLYMA08G36590 Glycine max GLYMA08G36590 N 0.856
GLYMA06G35330 Glycine max GLYMA06G35330 N 0.856
GRMZM2G015666 Zea mays GRMZM2G015666 N 0.856
Bo1g101110 Brassica oleracea Bo1g101110 N 0.856
MTR_0194s0050 Medicago truncatula MTR_0194s0050 N 0.856
Bra016377 Brassica rapa Bra016377 N 0.853
Eucgr.H04468 Eucalyptus grandis Eucgr.H04468 N 0.853
Bra012329 Brassica rapa Bra012329 N 0.853
gene12030-v1.0-hybrid Fragaria vesca gene12030-v1.0-hybrid N 0.853
gene22289-v1.0-hybrid Fragaria vesca gene22289-v1.0-hybrid N 0.853
Bra003886 Brassica rapa Bra003886 N 0.853
Bra016080 Brassica rapa Bra016080 N 0.853
evm.TU.supercontig_48.15 Carica papaya evm.TU.supercontig_48.15 N 0.853
evm.TU.supercontig_36.191 Carica papaya evm.TU.supercontig_36.191 N 0.853
Ciclev10001811m.g Citrus clementina Ciclev10001811m.g N 0.853
GLYMA03G39990 Glycine max GLYMA03G39990 N 0.853
GLYMA02G37313 Glycine max GLYMA02G37313 N 0.853
Bostr.12659s0103 Boechera stricta Bostr.12659s0103 N 0.853
Bostr.10273s0131 Boechera stricta Bostr.10273s0131 N 0.853
GLYMA04G10630 Glycine max GLYMA04G10630 N 0.853
Cagra.0114s0053 Capsella grandiflora Cagra.0114s0053 N 0.853
Cagra.4006s0007 Capsella grandiflora Cagra.4006s0007 N 0.853
Carubv10020657m.g Capsella rubella Carubv10020657m.g N 0.853
Bra040856 Brassica rapa Bra040856 N 0.853
Carubv10011476m.g Capsella rubella Carubv10011476m.g N 0.853
fgenesh1_pg.C_scaffold_1002057 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002057 N 0.853
Eucgr.B00048 Eucalyptus grandis Eucgr.B00048 N 0.853
Lus10000332.g Linum usitatissimum Lus10000332.g N 0.853
Thhalv10018867m.g Eutrema salsugineum Thhalv10018867m.g N 0.853
BHLH96 Arabidopsis thaliana AT1G72210 N 0.853
Thhalv10009836m.g Eutrema salsugineum Thhalv10009836m.g N 0.853
SapurV1A.1124s0170 Salix purpurea SapurV1A.1124s0170 N 0.853
SapurV1A.0613s0120 Salix purpurea SapurV1A.0613s0120 N 0.853
SapurV1A.1055s0160 Salix purpurea SapurV1A.1055s0160 N 0.853
PK14736.1 Cannabis sativa PK14736.1 N 0.853
PK21294.1 Cannabis sativa PK21294.1 N 0.853
chr5.CM0211.190.nc Lotus japonicus chr5.CM0211.190.nc N 0.853
chr6.CM0738.340.nd Lotus japonicus chr6.CM0738.340.nd N 0.853
chr1.LjT40H13.220.nd Lotus japonicus chr1.LjT40H13.220.nd N 0.853
chr1.LjT16B05.110.nd Lotus japonicus chr1.LjT16B05.110.nd N 0.853
AT1G22490 Arabidopsis thaliana AT1G22490 N 0.853
BGIOSGA030936 Oryza indica BGIOSGA030936 N 0.853
SapurV1A.0092s0130 Salix purpurea SapurV1A.0092s0130 N 0.853
Bo6g092570 Brassica oleracea Bo6g092570 N 0.853
MDP0000267178 Malus domestica MDP0000267178 N 0.853
Lus10029950.g Linum usitatissimum Lus10029950.g N 0.853
GLYMA06G10470 Glycine max GLYMA06G10470 N 0.853
Bo7g057920 Brassica oleracea Bo7g057920 N 0.853
Bo5g038570 Brassica oleracea Bo5g038570 N 0.853
MDP0000672131 Malus domestica MDP0000672131 N 0.853
Pavir.Bb02386 Panicum virgatum Pavir.Bb02386 N 0.853
Pavir.J22933 Panicum virgatum Pavir.J22933 N 0.853
orange1.1g036531m.g Citrus sinensis orange1.1g036531m.g N 0.853
orange1.1g020210m.g Citrus sinensis orange1.1g020210m.g N 0.853
MDP0000944210 Malus domestica MDP0000944210 N 0.853
Bo8g071490 Brassica oleracea Bo8g071490 N 0.853
Aquca_005_00478 Aquilegia coerulea Aquca_005_00478 N 0.853
MTR_3g099620 Medicago truncatula MTR_3g099620 N 0.853
MTR_7g113830 Medicago truncatula MTR_7g113830 N 0.853
Traes_5BL_DA72CE20D Triticum aestivum Traes_5BL_DA72CE20D N 0.853
TCM_034439 Theobroma cacao TCM_034439 N 0.853
VIT_14s0128g00110 Vitis vinifera VIT_14s0128g00110 N 0.853
OS09G0468700 Oryza sativa OS09G0468700 N 0.853
Cla005338 Citrullus lanatus Cla005338 N 0.853
POPTR_0013s02680 Populus trichocarpa POPTR_0013s02680 N 0.853
Ca_01181 Cicer arietinum Ca_01181 N 0.853
VIT_18s0001g06650 Vitis vinifera VIT_18s0001g06650 N 0.853
TCM_026599 Theobroma cacao TCM_026599 N 0.853
POPTR_0002s10230 Populus trichocarpa POPTR_0002s10230 N 0.853
POPTR_0005s04160 Populus trichocarpa POPTR_0005s04160 N 0.853
PRUPE_ppa011095mg Prunus persica PRUPE_ppa011095mg N 0.853
PRUPE_ppa009461mg Prunus persica PRUPE_ppa009461mg N 0.853
ORGLA09G0101900 Oryza glaberrima ORGLA09G0101900 N 0.853
OPUNC09G11790 Oryza punctata OPUNC09G11790 N 0.853
Sb02g027210 Sorghum bicolor Sb02g027210 N 0.853
OB09G19960 Oryza brachyantha OB09G19960 N 0.853
OMERI09G10430 Oryza meridionalis OMERI09G10430 N 0.853
ONIVA09G13890 Oryza nivara ONIVA09G13890 N 0.853
Cla020173 Citrullus lanatus Cla020173 N 0.853
MTR_1g082480 Medicago truncatula MTR_1g082480 N 0.853
MLOC_21759 Hordeum vulgare MLOC_21759 N 0.853
GLYMA19G42520 Glycine max GLYMA19G42520 N 0.853
cassava22781.valid.m1 Manihot esculenta cassava22781.valid.m1 N 0.853
cassava19507.valid.m1 Manihot esculenta cassava19507.valid.m1 N 0.853
GLYMA14G35560 Glycine max GLYMA14G35560 N 0.853
Cucsa.163550 Cucumis sativus Cucsa.163550 N 0.853
Cucsa.091670 Cucumis sativus Cucsa.091670 N 0.853
cassava35271.valid.m1 Manihot esculenta cassava35271.valid.m1 N 0.853
Cucsa.160250 Cucumis sativus Cucsa.160250 N 0.853
cassava31098.valid.m1 Manihot esculenta cassava31098.valid.m1 N 0.853
30128.m008737 Ricinus communis 30128.m008737 N 0.853
cassava13431.valid.m1 Manihot esculenta cassava13431.valid.m1 N 0.853
PGSC0003DMG400028578 Solanum tuberosum PGSC0003DMG400028578 N 0.853
Cla022458 Citrullus lanatus Cla022458 N 0.853
GSMUA_Achr8G17650_001 Musa acuminata GSMUA_Achr8G17650_001 N 0.853
Pm003380 Prunus mume Pm003380 N 0.853
Pm004489 Prunus mume Pm004489 N 0.853
GLYMA20G37550 Glycine max GLYMA20G37550 N 0.853
GRMZM2G082586 Zea mays GRMZM2G082586 N 0.853
ORUFI09G14410 Oryza rufipogon ORUFI09G14410 N 0.853
chr1.CM0544.580.nd Lotus japonicus chr1.CM0544.580.nd N 0.852
OS08G0483900 Oryza sativa OS08G0483900 N 0.851
ORGLA08G0160400 Oryza glaberrima ORGLA08G0160400 N 0.851
OPUNC08G16410 Oryza punctata OPUNC08G16410 N 0.851
BGIOSGA026779 Oryza indica BGIOSGA026779 N 0.851
OB08G25610 Oryza brachyantha OB08G25610 N 0.851
ORUFI08G20670 Oryza rufipogon ORUFI08G20670 N 0.851
ONIVA08G20580 Oryza nivara ONIVA08G20580 N 0.851
OBART08G18480 Oryza barthii OBART08G18480 N 0.851
OGLUM08G19420 Oryza glumaepatula OGLUM08G19420 N 0.851
OMERI08G14480 Oryza meridionalis OMERI08G14480 N 0.851
GSMUA_Achr3G06660_001 Musa acuminata GSMUA_Achr3G06660_001 N 0.848
Gorai.009G233000 Gossypium raimondii Gorai.009G233000 N 0.846
Lus10007139.g Linum usitatissimum Lus10007139.g N 0.845
Cucsa.313010 Cucumis sativus Cucsa.313010 N 0.845
Cla016479 Citrullus lanatus Cla016479 N 0.845
Thhalv10002990m.g Eutrema salsugineum Thhalv10002990m.g N 0.844
estExt_gwp_gw1.C_710125 Physcomitrella patens estExt_gwp_gw1.C_710125 N 0.844
GLYMA10G29760 Glycine max GLYMA10G29760 N 0.842
Ca_28086 Cicer arietinum Ca_28086 N 0.841
AMTR_s00008p00198780 Amborella trichopoda AMTR_s00008p00198780 N 0.840