CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00019p00254380
(
Amborella trichopoda
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
AMTR_s00019p00254380
T030489_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AMS
M09782_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AMS_01
0.871
0.653
SCRM
M09784_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ICE1_01
0.860
0.694
DYT1
M02654_2.00
Arabidopsis thaliana
TCACGTGWYTBRYK
MRYVARWCACGTGA
SELEX
Mathelier et al.(2014)
MA0580.1
0.845
0.551
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN07465
bHLH
79
127
TAKNIVSERVRRKKLNDRLYQLRSVVPIISKMDKASIIKDAIAYIQSLQ
Links
Other
bHLH
family TFs
Other
Amborella trichopoda
TFs
271 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy