AMTR_s00070p00149100 (Amborella trichopoda)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AMTR_s00070p00149100 T030516_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BHLH80
M06722_2.00
Arabidopsis thaliana
DNCMACTTGCH

DGCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH80_col_a
0.903 0.918
BHLH80
M06723_2.00
Arabidopsis thaliana
DKCMACTTGCA

TGCAAGTKGMH
Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a
0.903 0.918
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN

NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.861 0.837
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN20643 bHLH 230 278

Links

Other bHLH family TFs
Other Amborella trichopoda TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Gorai.013G138300 Gossypium raimondii Gorai.013G138300 I 0.903
Solyc06g065040.2 Solanum lycopersicum Solyc06g065040.2 I 0.903
TCM_036484 Theobroma cacao TCM_036484 I 0.903
BHLH80 Arabidopsis thaliana AT1G35460 D 0.903
VIT_18s0041g00690 Vitis vinifera VIT_18s0041g00690 I 0.903
scaffold_103992.1 Arabidopsis lyrata scaffold_103992.1 I 0.903
MDP0000269890 Malus domestica MDP0000269890 I 0.903
SapurV1A.0690s0120 Salix purpurea SapurV1A.0690s0120 I 0.903
PGSC0003DMG400031314 Solanum tuberosum PGSC0003DMG400031314 I 0.903
orange1.1g023215m.g Citrus sinensis orange1.1g023215m.g I 0.903
PRUPE_ppa011017mg Prunus persica PRUPE_ppa011017mg I 0.903
gene26880-v1.0-hybrid Fragaria vesca gene26880-v1.0-hybrid I 0.903
Pm004181 Prunus mume Pm004181 I 0.903
Cagra.18223s0002 Capsella grandiflora Cagra.18223s0002 I 0.903
Bostr.25463s0393 Boechera stricta Bostr.25463s0393 I 0.903
mgf002701m Mimulus guttatus mgf002701m I 0.903
Bostr.1774s0027 Boechera stricta Bostr.1774s0027 I 0.903
Cucsa.061590 Cucumis sativus Cucsa.061590 I 0.903
Cagra.9781s0002 Capsella grandiflora Cagra.9781s0002 I 0.903
cassava13743.valid.m1 Manihot esculenta cassava13743.valid.m1 I 0.903
Ciclev10002083m.g Citrus clementina Ciclev10002083m.g I 0.903
Carubv10010050m.g Capsella rubella Carubv10010050m.g I 0.903
Carubv10001721m.g Capsella rubella Carubv10001721m.g I 0.903
SapurV1A.1647s0020 Salix purpurea SapurV1A.1647s0020 I 0.903
SapurV1A.0391s0050 Salix purpurea SapurV1A.0391s0050 I 0.903
Bo6g043840 Brassica oleracea Bo6g043840 I 0.903
Thhalv10028883m.g Eutrema salsugineum Thhalv10028883m.g I 0.903
BHLH81 Arabidopsis thaliana AT4G09180 I 0.903
fgenesh2_kg.6__2924__AT4G09180.1 Arabidopsis lyrata fgenesh2_kg.6__2924__AT4G09180.1 I 0.903
Bo8g026850 Brassica oleracea Bo8g026850 I 0.903
PK06301.1 Cannabis sativa PK06301.1 I 0.903
GLYMA08G26110 Glycine max GLYMA08G26110 I 0.903
Bra036760 Brassica rapa Bra036760 I 0.903
Bra028088 Brassica rapa Bra028088 I 0.903
Bra034421 Brassica rapa Bra034421 I 0.879
Bo5g085170 Brassica oleracea Bo5g085170 I 0.879
MTR_4g033295 Medicago truncatula MTR_4g033295 I 0.876
TRIUR3_26625 Triticum urartu TRIUR3_26625 I 0.861
OB08G26810 Oryza brachyantha OB08G26810 I 0.861
Traes_7AS_4FAB72487 Triticum aestivum Traes_7AS_4FAB72487 I 0.861
MLOC_67834 Hordeum vulgare MLOC_67834 I 0.861
Traes_7DS_B671A4EAD Triticum aestivum Traes_7DS_B671A4EAD I 0.861
F775_24151 Aegilops tauschii F775_24151 I 0.861
BGIOSGA031008 Oryza indica BGIOSGA031008 I 0.861
OLONG_017566 Oryza longistaminata OLONG_017566 I 0.861
BGIOSGA028963 Oryza indica BGIOSGA028963 I 0.861
OPUNC08G18020 Oryza punctata OPUNC08G18020 I 0.861
OPUNC09G13060 Oryza punctata OPUNC09G13060 I 0.861
ORGLA08G0174800 Oryza glaberrima ORGLA08G0174800 I 0.861
ONIVA08G22410 Oryza nivara ONIVA08G22410 I 0.861
ONIVA08G17500 Oryza nivara ONIVA08G17500 I 0.861
OMERI08G16700 Oryza meridionalis OMERI08G16700 I 0.861
OMERI09G11370 Oryza meridionalis OMERI09G11370 I 0.861
ORGLA09G0112900 Oryza glaberrima ORGLA09G0112900 I 0.861
ORUFI08G22260 Oryza rufipogon ORUFI08G22260 I 0.861
OGLUM08G21000 Oryza glumaepatula OGLUM08G21000 I 0.861
BRADI3G39927 Brachypodium distachyon BRADI3G39927 I 0.861
OBART09G14660 Oryza barthii OBART09G14660 I 0.861
OGLUM09G15300 Oryza glumaepatula OGLUM09G15300 I 0.861
OS09G0487900 Oryza sativa OS09G0487900 I 0.861
ORUFI09G15820 Oryza rufipogon ORUFI09G15820 I 0.861
OS08G0506700 Oryza sativa OS08G0506700 D 0.861
OBART08G19860 Oryza barthii OBART08G19860 I 0.861
gw1.185.89.1 Physcomitrella patens gw1.185.89.1 I 0.858
Aquca_058_00134 Aquilegia coerulea Aquca_058_00134 I 0.854
Ciclev10005233m.g Citrus clementina Ciclev10005233m.g I 0.849
Eucgr.A02417 Eucalyptus grandis Eucgr.A02417 I 0.849
Lus10031255.g Linum usitatissimum Lus10031255.g I 0.849
MDP0000180376 Malus domestica MDP0000180376 I 0.849
Lus10031826.g Linum usitatissimum Lus10031826.g I 0.849
orange1.1g018007m.g Citrus sinensis orange1.1g018007m.g I 0.849
SapurV1A.0018s0320 Salix purpurea SapurV1A.0018s0320 I 0.849
SapurV1A.0133s0050 Salix purpurea SapurV1A.0133s0050 I 0.849
Lus10021023.g Linum usitatissimum Lus10021023.g I 0.849
PK18038.1 Cannabis sativa PK18038.1 I 0.849
gene20622-v1.0-hybrid Fragaria vesca gene20622-v1.0-hybrid I 0.849
gene00545-v1.0-hybrid Fragaria vesca gene00545-v1.0-hybrid I 0.849
Gorai.002G228900 Gossypium raimondii Gorai.002G228900 I 0.849
Gorai.006G140200 Gossypium raimondii Gorai.006G140200 I 0.849
PDK_20s1391471g001 Phoenix dactylifera PDK_20s1391471g001 I 0.849
evm.TU.supercontig_84.89 Carica papaya evm.TU.supercontig_84.89 I 0.849
VIT_08s0007g07810 Vitis vinifera VIT_08s0007g07810 I 0.849
POPTR_0006s05640 Populus trichocarpa POPTR_0006s05640 I 0.849
Cla017792 Citrullus lanatus Cla017792 I 0.849
Pm000447 Prunus mume Pm000447 I 0.849
Pm025821 Prunus mume Pm025821 I 0.849
TCM_024842 Theobroma cacao TCM_024842 I 0.849
Aquca_009_00280 Aquilegia coerulea Aquca_009_00280 I 0.849
PRUPE_ppa019977mg Prunus persica PRUPE_ppa019977mg I 0.849
POPTR_0016s05100 Populus trichocarpa POPTR_0016s05100 I 0.849
Solyc10g079050.1 Solanum lycopersicum Solyc10g079050.1 I 0.849
PRUPE_ppa006295mg Prunus persica PRUPE_ppa006295mg I 0.849
29216.m000261 Ricinus communis 29216.m000261 I 0.849
cassava44054.valid.m1 Manihot esculenta cassava44054.valid.m1 I 0.849
Cucsa.242910 Cucumis sativus Cucsa.242910 I 0.849
GLYMA10G12150 Glycine max GLYMA10G12150 I 0.849
mgf016734m Mimulus guttatus mgf016734m I 0.849
cassava35967.valid.m1 Manihot esculenta cassava35967.valid.m1 I 0.849
cassava30692.valid.m1 Manihot esculenta cassava30692.valid.m1 I 0.849
GSMUA_Achr5G22310_001 Musa acuminata GSMUA_Achr5G22310_001 I 0.849
PGSC0003DMG400008153 Solanum tuberosum PGSC0003DMG400008153 I 0.849
GSMUA_Achr7G20490_001 Musa acuminata GSMUA_Achr7G20490_001 I 0.849
cassava2126.valid.m1 Manihot esculenta cassava2126.valid.m1 I 0.849
POPTR_0009s06910 Populus trichocarpa POPTR_0009s06910 I 0.847
PGSC0003DMG400025263 Solanum tuberosum PGSC0003DMG400025263 I 0.847
TCM_005925 Theobroma cacao TCM_005925 I 0.847
30152.m002405 Ricinus communis 30152.m002405 I 0.847
cassava29651.valid.m1 Manihot esculenta cassava29651.valid.m1 I 0.847
e_gw1.34.393.1 Physcomitrella patens e_gw1.34.393.1 I 0.847
Solyc01g086870.2 Solanum lycopersicum Solyc01g086870.2 I 0.847
30074.m001421 Ricinus communis 30074.m001421 I 0.847
Gorai.004G035800 Gossypium raimondii Gorai.004G035800 I 0.847
VIT_13s0064g01290 Vitis vinifera VIT_13s0064g01290 I 0.847
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I 0.846
Solyc11g056650.1 Solanum lycopersicum Solyc11g056650.1 I 0.846
PGSC0003DMG400022058 Solanum tuberosum PGSC0003DMG400022058 I 0.846
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I 0.846
GSMUA_Achr6G21220_001 Musa acuminata GSMUA_Achr6G21220_001 I 0.845
Pavir.Aa01423 Panicum virgatum Pavir.Aa01423 I 0.845