CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00096p00160080
(
Amborella trichopoda
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
AMTR_s00096p00160080
T030522_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCRM
M09784_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ICE1_01
0.869
0.780
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN02438
bHLH
13
62
EREENLMVERRRRKKLNDRLYMLRSVVPKISKMDRASILGNAIDAIDYLK
Links
Other
bHLH
family TFs
Other
Amborella trichopoda
TFs
174 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla002682
Citrullus lanatus
Cla002682
I
0.869
Cla003283
Citrullus lanatus
Cla003283
I
0.869
Pm016093
Prunus mume
Pm016093
I
0.869
Ca_01394
Cicer arietinum
Ca_01394
I
0.869
VIT_17s0000g00330
Vitis vinifera
VIT_17s0000g00330
I
0.869
VIT_01s0244g00130
Vitis vinifera
VIT_01s0244g00130
I
0.869
VIT_14s0068g01200
Vitis vinifera
VIT_14s0068g01200
I
0.869
Pm024587
Prunus mume
Pm024587
I
0.869
30147.m014419
Ricinus communis
30147.m014419
I
0.869
estExt_fgenesh1_pg.C_300202
Physcomitrella patens
estExt_fgenesh1_pg.C_300202
I
0.869
estExt_Genewise1.C_510113
Physcomitrella patens
estExt_Genewise1.C_510113
I
0.869
mgf012194m
Mimulus guttatus
mgf012194m
I
0.869
Cucsa.156040
Cucumis sativus
Cucsa.156040
I
0.869
Cucsa.134750
Cucumis sativus
Cucsa.134750
I
0.869
cassava17838.valid.m1
Manihot esculenta
cassava17838.valid.m1
I
0.869
cassava37254.valid.m1
Manihot esculenta
cassava37254.valid.m1
I
0.869
TRIUR3_17003
Triticum urartu
TRIUR3_17003
I
0.869
Traes_7DL_2A7EF919F
Triticum aestivum
Traes_7DL_2A7EF919F
I
0.869
SELMODRAFT_138758
Selaginella moellendorffii
SELMODRAFT_138758
I
0.869
SELMODRAFT_75047
Selaginella moellendorffii
SELMODRAFT_75047
I
0.869
SELMODRAFT_91237
Selaginella moellendorffii
SELMODRAFT_91237
I
0.869
SELMODRAFT_119431
Selaginella moellendorffii
SELMODRAFT_119431
I
0.869
Sb05g019530
Sorghum bicolor
Sb05g019530
I
0.869
PRUPE_ppa018220mg
Prunus persica
PRUPE_ppa018220mg
I
0.869
Sb03g044660
Sorghum bicolor
Sb03g044660
I
0.869
SELMODRAFT_94010
Selaginella moellendorffii
SELMODRAFT_94010
I
0.869
Si001874m.g
Setaria italica
Si001874m.g
I
0.869
Traes_7AL_ACAC47D88
Triticum aestivum
Traes_7AL_ACAC47D88
I
0.869
Traes_7BL_BF5300D88
Triticum aestivum
Traes_7BL_BF5300D88
I
0.869
TRAES3BF001100060CFD_g
Triticum aestivum
TRAES3BF001100060CFD_g
I
0.869
TCM_017336
Theobroma cacao
TCM_017336
I
0.869
Si026212m.g
Setaria italica
Si026212m.g
I
0.869
TCM_014741
Theobroma cacao
TCM_014741
I
0.869
mgf015974m
Mimulus guttatus
mgf015974m
I
0.869
mgf016462m
Mimulus guttatus
mgf016462m
I
0.869
Pavir.Hb00982
Panicum virgatum
Pavir.Hb00982
I
0.869
SapurV1A.0517s0250
Salix purpurea
SapurV1A.0517s0250
I
0.869
SapurV1A.0672s0200
Salix purpurea
SapurV1A.0672s0200
I
0.869
Pavir.Eb03736
Panicum virgatum
Pavir.Eb03736
I
0.869
Pavir.Ea03858
Panicum virgatum
Pavir.Ea03858
I
0.869
orange1.1g011370m.g
Citrus sinensis
orange1.1g011370m.g
I
0.869
orange1.1g047004m.g
Citrus sinensis
orange1.1g047004m.g
I
0.869
SapurV1A.0774s0030
Salix purpurea
SapurV1A.0774s0030
I
0.869
Thhalv10004059m.g
Eutrema salsugineum
Thhalv10004059m.g
I
0.869
LjSGA_024382.1
Lotus japonicus
LjSGA_024382.1
I
0.869
PDK_20s1347451g001
Phoenix dactylifera
PDK_20s1347451g001
I
0.869
chr1.CM1880.50.nc
Lotus japonicus
chr1.CM1880.50.nc
I
0.869
PK06940.1
Cannabis sativa
PK06940.1
I
0.869
Thhalv10007566m.g
Eutrema salsugineum
Thhalv10007566m.g
I
0.869
PK06841.1
Cannabis sativa
PK06841.1
I
0.869
MDP0000662999
Malus domestica
MDP0000662999
I
0.869
MDP0000304669
Malus domestica
MDP0000304669
I
0.869
Cagra.23157s0001
Capsella grandiflora
Cagra.23157s0001
I
0.869
Carubv10017099m.g
Capsella rubella
Carubv10017099m.g
I
0.869
Ciclev10015052m.g
Citrus clementina
Ciclev10015052m.g
I
0.869
Bostr.13671s0164
Boechera stricta
Bostr.13671s0164
I
0.869
Bostr.0556s0344
Boechera stricta
Bostr.0556s0344
I
0.869
Aquca_019_00147
Aquilegia coerulea
Aquca_019_00147
I
0.869
Aquca_100_00035
Aquilegia coerulea
Aquca_100_00035
I
0.869
Eucgr.G01938
Eucalyptus grandis
Eucgr.G01938
I
0.869
evm.TU.supercontig_1024.1
Carica papaya
evm.TU.supercontig_1024.1
I
0.869
Gorai.007G072600
Gossypium raimondii
Gorai.007G072600
I
0.869
MDP0000247912
Malus domestica
MDP0000247912
I
0.869
Gorai.007G044800
Gossypium raimondii
Gorai.007G044800
I
0.869
Gorai.001G275600
Gossypium raimondii
Gorai.001G275600
I
0.869
evm.TU.supercontig_70.77
Carica papaya
evm.TU.supercontig_70.77
I
0.869
gene06435-v1.0-hybrid
Fragaria vesca
gene06435-v1.0-hybrid
I
0.869
PRUPE_ppa005038mg
Prunus persica
PRUPE_ppa005038mg
I
0.869
Solyc03g118310.2
Solanum lycopersicum
Solyc03g118310.2
I
0.869
GLYMA19G27483
Glycine max
GLYMA19G27483
I
0.869
GRMZM2G033356
Zea mays
GRMZM2G033356
I
0.869
GRMZM2G172297
Zea mays
GRMZM2G172297
I
0.869
GLYMA16G05390
Glycine max
GLYMA16G05390
I
0.869
GLYMA06G17330
Glycine max
GLYMA06G17330
I
0.869
ICE1
Arabidopsis lyrata
fgenesh2_kg.5__441__AT3G26744.2
I
0.869
GLYMA04G37750
Glycine max
GLYMA04G37750
I
0.869
GRMZM2G173534
Zea mays
GRMZM2G173534
I
0.869
GSMUA_Achr10G12060_001
Musa acuminata
GSMUA_Achr10G12060_001
I
0.869
LPERR11G11940
Leersia perrieri
LPERR11G11940
I
0.869
MLOC_46407
Hordeum vulgare
MLOC_46407
I
0.869
MLOC_76805
Hordeum vulgare
MLOC_76805
I
0.869
LPERR01G37160
Leersia perrieri
LPERR01G37160
I
0.869
GSMUA_Achr6G08070_001
Musa acuminata
GSMUA_Achr6G08070_001
I
0.869
GSMUA_Achr10G18380_001
Musa acuminata
GSMUA_Achr10G18380_001
I
0.869
GSMUA_Achr1G07450_001
Musa acuminata
GSMUA_Achr1G07450_001
I
0.869
F775_14780
Aegilops tauschii
F775_14780
I
0.869
BRADI2G59497
Brachypodium distachyon
BRADI2G59497
I
0.869
BGIOSGA035358
Oryza indica
BGIOSGA035358
I
0.869
Bo00285s440
Brassica oleracea
Bo00285s440
I
0.869
Bo5g016510
Brassica oleracea
Bo5g016510
I
0.869
BGIOSGA000206
Oryza indica
BGIOSGA000206
I
0.869
SCRM
Arabidopsis thaliana
AT3G26744
D
0.869
AMTR_s00016p00170610
Amborella trichopoda
AMTR_s00016p00170610
I
0.869
SCRM2
Arabidopsis thaliana
AT1G12860
I
0.869
Bo7g083870
Brassica oleracea
Bo7g083870
I
0.869
Bo8g065080
Brassica oleracea
Bo8g065080
I
0.869
Bra032947
Brassica rapa
Bra032947
I
0.869
Bra034246
Brassica rapa
Bra034246
I
0.869
Bra025226
Brassica rapa
Bra025226
I
0.869
Bra019794
Brassica rapa
Bra019794
I
0.869
Bo9g008020
Brassica oleracea
Bo9g008020
I
0.869
Bra016749
Brassica rapa
Bra016749
I
0.869
MTR_3g498695
Medicago truncatula
MTR_3g498695
I
0.869
GSMUA_Achr1G07330_001
Musa acuminata
GSMUA_Achr1G07330_001
I
0.869
ORGLA01G0363500
Oryza glaberrima
ORGLA01G0363500
I
0.869
ORGLA11G0129200
Oryza glaberrima
ORGLA11G0129200
I
0.869
OPUNC11G12640
Oryza punctata
OPUNC11G12640
I
0.869
ONIVA12G10770
Oryza nivara
ONIVA12G10770
I
0.869
OMERI11G12580
Oryza meridionalis
OMERI11G12580
I
0.869
ONIVA01G48650
Oryza nivara
ONIVA01G48650
I
0.869
ORUFI01G46010
Oryza rufipogon
ORUFI01G46010
I
0.869
ORUFI11G16280
Oryza rufipogon
ORUFI11G16280
I
0.869
POPTR_0012s10780
Populus trichocarpa
POPTR_0012s10780
I
0.869
POPTR_0015s11650
Populus trichocarpa
POPTR_0015s11650
I
0.869
PGSC0003DMG400014246
Solanum tuberosum
PGSC0003DMG400014246
I
0.869
OS11G0523700
Oryza sativa
OS11G0523700
I
0.869
OS01G0928000
Oryza sativa
OS01G0928000
I
0.869
OMERI01G39590
Oryza meridionalis
OMERI01G39590
I
0.869
OPUNC01G41620
Oryza punctata
OPUNC01G41620
I
0.869
OGLUM11G14700
Oryza glumaepatula
OGLUM11G14700
I
0.869
OGLUM01G46870
Oryza glumaepatula
OGLUM01G46870
I
0.869
OBART11G15260
Oryza barthii
OBART11G15260
I
0.869
OBART01G42600
Oryza barthii
OBART01G42600
I
0.869
POPTR_0006s07420
Populus trichocarpa
POPTR_0006s07420
I
0.866
gw1.90.96.1
Physcomitrella patens
gw1.90.96.1
I
0.866
estExt_fgenesh1_pg.C_1240017
Physcomitrella patens
estExt_fgenesh1_pg.C_1240017
I
0.866
Aquca_072_00056
Aquilegia coerulea
Aquca_072_00056
I
0.866
Traes_4DS_7B0E8D459
Triticum aestivum
Traes_4DS_7B0E8D459
I
0.863
F775_15875
Aegilops tauschii
F775_15875
I
0.863
TRIUR3_16046
Triticum urartu
TRIUR3_16046
I
0.863
Pavir.Ha01426
Panicum virgatum
Pavir.Ha01426
I
0.858
Ca_23892
Cicer arietinum
Ca_23892
I
0.858
GSMUA_Achr11G09640_001
Musa acuminata
GSMUA_Achr11G09640_001
I
0.858
MTR_7g083900
Medicago truncatula
MTR_7g083900
I
0.858
evm.TU.supercontig_20.95
Carica papaya
evm.TU.supercontig_20.95
I
0.856
Eucgr.G01783
Eucalyptus grandis
Eucgr.G01783
I
0.856
VIT_01s0127g00860
Vitis vinifera
VIT_01s0127g00860
I
0.856
SapurV1A.3355s0020
Salix purpurea
SapurV1A.3355s0020
I
0.853
POPTR_0018s13830
Populus trichocarpa
POPTR_0018s13830
I
0.853
SapurV1A.0140s0250
Salix purpurea
SapurV1A.0140s0250
I
0.853
MLOC_56814
Hordeum vulgare
MLOC_56814
I
0.851
mgf018455m
Mimulus guttatus
mgf018455m
I
0.850
PRUPE_ppa010972mg
Prunus persica
PRUPE_ppa010972mg
I
0.849
SELMODRAFT_451590
Selaginella moellendorffii
SELMODRAFT_451590
I
0.849
estExt_fgenesh1_pg.C_1590022
Physcomitrella patens
estExt_fgenesh1_pg.C_1590022
I
0.849
e_gw1.25.105.1
Physcomitrella patens
e_gw1.25.105.1
I
0.849
Cucsa.010660
Cucumis sativus
Cucsa.010660
I
0.849
Pm008898
Prunus mume
Pm008898
I
0.849
SELMODRAFT_16038
Selaginella moellendorffii
SELMODRAFT_16038
I
0.849
SELMODRAFT_16039
Selaginella moellendorffii
SELMODRAFT_16039
I
0.849
Cla016068
Citrullus lanatus
Cla016068
I
0.849
SELMODRAFT_430203
Selaginella moellendorffii
SELMODRAFT_430203
I
0.849
estExt_gwp_gw1.C_1820005
Physcomitrella patens
estExt_gwp_gw1.C_1820005
I
0.845
MDP0000219146
Malus domestica
MDP0000219146
I
0.845
fgenesh1_pg.scaffold_1000274
Physcomitrella patens
fgenesh1_pg.scaffold_1000274
I
0.845
gw1.257.54.1
Physcomitrella patens
gw1.257.54.1
I
0.845
SCRM2
Arabidopsis lyrata
Al_scaffold_0001_1326
I
0.842
Cagra.0568s0207
Capsella grandiflora
Cagra.0568s0207
I
0.839
GLYMA17G06610
Glycine max
GLYMA17G06610
I
0.839
PGSC0003DMG401028788
Solanum tuberosum
PGSC0003DMG401028788
I
0.839
Cla023112
Citrullus lanatus
Cla023112
I
0.839
AMTR_s00019p00254380
Amborella trichopoda
AMTR_s00019p00254380
I
0.839
Carubv10009081m.g
Capsella rubella
Carubv10009081m.g
I
0.839
Sb04g001650
Sorghum bicolor
Sb04g001650
I
0.839
Cucsa.088960
Cucumis sativus
Cucsa.088960
I
0.839
Pavir.Ab00204
Panicum virgatum
Pavir.Ab00204
I
0.839
Lus10043199.g
Linum usitatissimum
Lus10043199.g
I
0.839
MLOC_52192
Hordeum vulgare
MLOC_52192
I
0.839
Lus10032542.g
Linum usitatissimum
Lus10032542.g
I
0.839
BRADI4G17460
Brachypodium distachyon
BRADI4G17460
I
0.839
BRADI3G01910
Brachypodium distachyon
BRADI3G01910
I
0.839
GLYMA05G38530
Glycine max
GLYMA05G38530
I
0.839
Solyc06g068870.2
Solanum lycopersicum
Solyc06g068870.2
I
0.839
GLYMA13G00480
Glycine max
GLYMA13G00480
I
0.839