AMTR_s00101p00150740 (Amborella trichopoda)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AMTR_s00101p00150740 T030527_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK07858.1
M01123_2.00
Cannabis sativa
HCACGTGB

VCACGTGD
PBM
Lambert et al.(2019)
pTH11370
0.869 0.714
PK20225.1
M01128_2.00
Cannabis sativa
NCACGTGVN

NBCACGTGN
PBM
Lambert et al.(2019)
pTH11274
0.840 0.673
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERM99122 bHLH 79 127

Links

Other bHLH family TFs
Other Amborella trichopoda TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
mgf017635m Mimulus guttatus mgf017635m I 0.869
PGSC0003DMG400007457 Solanum tuberosum PGSC0003DMG400007457 I 0.869
POPTR_0008s11490 Populus trichocarpa POPTR_0008s11490 I 0.869
POPTR_0010s14010 Populus trichocarpa POPTR_0010s14010 I 0.869
Aquca_002_01095 Aquilegia coerulea Aquca_002_01095 I 0.869
Ciclev10031900m.g Citrus clementina Ciclev10031900m.g I 0.869
GSMUA_Achr11G13440_001 Musa acuminata GSMUA_Achr11G13440_001 I 0.869
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.869
Eucgr.G02351 Eucalyptus grandis Eucgr.G02351 I 0.869
MTR_1g093750 Medicago truncatula MTR_1g093750 I 0.869
PRUPE_ppa019406mg Prunus persica PRUPE_ppa019406mg I 0.869
Cucsa.283920 Cucumis sativus Cucsa.283920 I 0.869
TCM_011873 Theobroma cacao TCM_011873 I 0.869
Cla020671 Citrullus lanatus Cla020671 I 0.869
Ca_08440 Cicer arietinum Ca_08440 I 0.869
VIT_01s0011g02940 Vitis vinifera VIT_01s0011g02940 I 0.869
Pm029004 Prunus mume Pm029004 I 0.869
29738.m001043 Ricinus communis 29738.m001043 I 0.869
cassava46299.m1 Manihot esculenta cassava46299.m1 I 0.869
SELMODRAFT_46532 Selaginella moellendorffii SELMODRAFT_46532 I 0.869
SELMODRAFT_56610 Selaginella moellendorffii SELMODRAFT_56610 I 0.869
cassava16550.m1 Manihot esculenta cassava16550.m1 I 0.869
GLYMA20G32660 Glycine max GLYMA20G32660 I 0.869
evm.TU.supercontig_53.118 Carica papaya evm.TU.supercontig_53.118 I 0.869
MDP0000319726 Malus domestica MDP0000319726 I 0.869
MDP0000271420 Malus domestica MDP0000271420 I 0.869
Lus10021711.g Linum usitatissimum Lus10021711.g I 0.869
orange1.1g037785m.g Citrus sinensis orange1.1g037785m.g I 0.869
SapurV1A.0079s0530 Salix purpurea SapurV1A.0079s0530 I 0.869
PK07858.1 Cannabis sativa PK07858.1 D 0.869
SapurV1A.3056s0010 Salix purpurea SapurV1A.3056s0010 I 0.869
SapurV1A.0304s0070 Salix purpurea SapurV1A.0304s0070 I 0.869
Gorai.013G079600 Gossypium raimondii Gorai.013G079600 I 0.869
Lus10035056.g Linum usitatissimum Lus10035056.g I 0.869
Gorai.008G186700 Gossypium raimondii Gorai.008G186700 I 0.869
GLYMA10G34910 Glycine max GLYMA10G34910 I 0.869
GLYMA02G15780 Glycine max GLYMA02G15780 I 0.861
MTR_4g087920 Medicago truncatula MTR_4g087920 I 0.861
Ca_06386 Cicer arietinum Ca_06386 I 0.861
GSMUA_Achr6G30610_001 Musa acuminata GSMUA_Achr6G30610_001 I 0.859
GSMUA_Achr7G07280_001 Musa acuminata GSMUA_Achr7G07280_001 I 0.859
F775_11347 Aegilops tauschii F775_11347 I 0.851
F775_14190 Aegilops tauschii F775_14190 I 0.851
AMTR_s00007p00170710 Amborella trichopoda AMTR_s00007p00170710 I 0.848
GSMUA_Achr7G10740_001 Musa acuminata GSMUA_Achr7G10740_001 I 0.840
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.840
BRADI3G54070 Brachypodium distachyon BRADI3G54070 I 0.840
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.840
PK20225.1 Cannabis sativa PK20225.1 D 0.840
Traes_6BL_AEB13ECDE Triticum aestivum Traes_6BL_AEB13ECDE I 0.840
Carubv10020515m.g Capsella rubella Carubv10020515m.g I 0.839
chr2.CM0749.390.nc Lotus japonicus chr2.CM0749.390.nc I 0.839
Cla000223 Citrullus lanatus Cla000223 I 0.839
Thhalv10018758m.g Eutrema salsugineum Thhalv10018758m.g I 0.839
Ca_24775 Cicer arietinum Ca_24775 I 0.839
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I 0.839
Cagra.0417s0002 Capsella grandiflora Cagra.0417s0002 I 0.839
Bostr.0556s0241 Boechera stricta Bostr.0556s0241 I 0.839
Cagra.1157s0003 Capsella grandiflora Cagra.1157s0003 I 0.839
Carubv10017470m.g Capsella rubella Carubv10017470m.g I 0.839
Bostr.26959s0001 Boechera stricta Bostr.26959s0001 I 0.839
Thhalv10004524m.g Eutrema salsugineum Thhalv10004524m.g I 0.839
SELMODRAFT_417246 Selaginella moellendorffii SELMODRAFT_417246 I 0.839
F775_10096 Aegilops tauschii F775_10096 I 0.839
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I 0.839
Bra026510 Brassica rapa Bra026510 I 0.839
fgenesh2_kg.2__1138__AT1G68810.1 Arabidopsis lyrata fgenesh2_kg.2__1138__AT1G68810.1 I 0.839
BHLH32 Arabidopsis lyrata fgenesh2_kg.5__324__AT3G25710.1 I 0.839
GRMZM2G043854 Zea mays GRMZM2G043854 I 0.839
GLYMA02G11190 Glycine max GLYMA02G11190 I 0.839
GLYMA01G22530 Glycine max GLYMA01G22530 I 0.839
Bra025158 Brassica rapa Bra025158 I 0.839
Bra004338 Brassica rapa Bra004338 I 0.839
BHLH32 Arabidopsis thaliana AT3G25710 I 0.839
BHLH30 Arabidopsis thaliana AT1G68810 I 0.839
AMTR_s00010p00144270 Amborella trichopoda AMTR_s00010p00144270 I 0.839
Bo2g138630 Brassica oleracea Bo2g138630 I 0.839
Bo6g108270 Brassica oleracea Bo6g108270 I 0.839
Bra004015 Brassica rapa Bra004015 I 0.839
Bo7g081980 Brassica oleracea Bo7g081980 I 0.839
LPERR03G10060 Leersia perrieri LPERR03G10060 I 0.839
MLOC_66385 Hordeum vulgare MLOC_66385 I 0.839
Si039730m.g Setaria italica Si039730m.g I 0.839
SELMODRAFT_412681 Selaginella moellendorffii SELMODRAFT_412681 I 0.839
Sb01g040450 Sorghum bicolor Sb01g040450 I 0.839
Solyc04g006990.2 Solanum lycopersicum Solyc04g006990.2 I 0.839
Solyc05g009880.2 Solanum lycopersicum Solyc05g009880.2 I 0.839
Traes_4DL_7BD3165FB Triticum aestivum Traes_4DL_7BD3165FB I 0.839
Traes_4BL_A2B32FCEE Triticum aestivum Traes_4BL_A2B32FCEE I 0.839
Traes_4AS_DD16F89E7 Triticum aestivum Traes_4AS_DD16F89E7 I 0.839
PGSC0003DMG400000824 Solanum tuberosum PGSC0003DMG400000824 I 0.839
OS03G0260600 Oryza sativa OS03G0260600 I 0.839
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I 0.839
OBART03G11320 Oryza barthii OBART03G11320 I 0.839
OB03G21490 Oryza brachyantha OB03G21490 I 0.839
OLONG_004075 Oryza longistaminata OLONG_004075 I 0.839
ONIVA03G12280 Oryza nivara ONIVA03G12280 I 0.839
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I 0.839
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I 0.839
TRIUR3_31897 Triticum urartu TRIUR3_31897 I 0.839